RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 DGAT2L6Q6ZPD8 337 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 WDR53Q7Z5U6 358 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 P3H2Q8IVL5 708 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 RCBTB1Q8NDN9 531 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 STT3BQ8TCJ2 826 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 ACOT11Q8WXI4 607 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 ZG16BQ96DA0 208 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 DGCR14Q96DF8 476 aaKnown RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 HSPBAP1Q96EW2 488 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 LCORQ96JN0 433 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 LRFN5Q96NI6 719 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 CCNL2Q96S94 520 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 BARD1Q99728 777 aaKnown RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 TUBA1CQ9BQE3 449 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 ZPBPQ9BS86 351 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 SLC26A1Q9H2B4 701 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 UBQLN4Q9NRR5 601 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 SIDT1Q9NXL6 827 aaKnown RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 RHCGQ9UBD6 479 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 TMEM5Q9Y2B1 443 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 CLDN16Q9Y5I7 305 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 SDK1Q7Z5N4 2213 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 VCANP13611 3396 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 TRBV4-1A0A0J9YWV2 114 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 C2orf92A0A1B0GVN3 265 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 GXYLT2A0PJZ3 443 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 SH3D21A4FU49 640 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 EIF4E1BA6NMX2 242 aaKnown RBP12.45□□□□□ -0.42
PTCH1-215ENST00000547672 EFCAB7A8K855 629 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 B4E171 279 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 IL33O95760 270 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CLIC3O95833 236 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 ANGPTL1O95841 491 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 ZNF806P0C7X5 589 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CT45A8P0DMV1 189 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CT45A9P0DMV2 189 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 ATP6V1B1P15313 513 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CCKBRP32239 447 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 ADH7P40394 386 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 TSPAN7P41732 249 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 STAT5AP42229 794 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CLK3P49761 638 aaKnown RBP12.45□□□□□ -0.42
PTCH1-215ENST00000547672 EMP2P54851 167 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CD47Q08722 323 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 LAPTM4AQ15012 233 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CT45A2Q5DJT8 189 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 ENTPD8Q5MY95 495 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CCNJQ5T5M9 372 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 PWWP2BQ6NUJ5 590 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 BORAQ6PGQ7 559 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 ZNF773Q6PK81 442 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 RBM44Q6ZP01 1051 aaKnown RBP12.45□□□□□ -0.42
PTCH1-215ENST00000547672 RBM45Q8IUH3 476 aaKnown RBP12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CLIP4Q8N3C7 705 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 BCORP1Q8N888 145 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 OR4K5Q8NGD3 323 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 OR1N1Q8NGS0 311 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 SLC7A13Q8TCU3 470 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 SLC2A12Q8TD20 617 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-215ENST00000547672 GTPBP3Q969Y2 492 aaKnown RBP12.45□□□□□ -0.42
PTCH1-215ENST00000547672 TP53INP1Q96A56 240 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 SLC41A3Q96GZ6 507 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 MPP4Q96JB8 637 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 CMKLR1Q99788 373 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 FUZQ9BT04 418 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 OR8D2Q9GZM6 311 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 VN1R1Q9GZP7 353 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 SOX17Q9H6I2 414 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-215ENST00000547672 WDR54Q9H977 334 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 POLR1BQ9H9Y6 1135 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 SCN2AQ99250 2005 aa12.45□□□□□ -0.42
PTCH1-215ENST00000547672 SNTNA6NMZ2 147 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 E9PQ18 207 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 TO15178 435 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 FOXD2O60548 495 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-215ENST00000547672 IGKV3-11P04433 115 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 TFAP2AP05549 437 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 SMIM18P0DKX4 95 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 CRHBPP24387 322 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 NRG3P56975 720 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 RAB15P59190 212 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 COPZ1P61923 177 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 RAPSNQ13702 412 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 LPAL2Q16609 132 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 VWA2Q5GFL6 755 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 MRPL2Q5T653 305 aaKnown RBP12.44□□□□□ -0.42
PTCH1-215ENST00000547672 CASP12Q6UXS9 341 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 TMPRSS9Q7Z410 1059 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 LACC1Q8IV20 430 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 SVOPQ8N4V2 548 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 SIMC1Q8NDZ2 872 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 OR9Q2Q8NGE9 314 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 OR4D11Q8NGI4 311 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 OR5L2Q8NGL0 311 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 DIO2Q92813 273 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 OSTF1Q92882 214 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 MYDGFQ969H8 173 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 PRRX2Q99811 253 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 QRSL1Q9H0R6 528 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms