RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CHP1Q99653 195 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 BCL7BQ9BQE9 202 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 C11orf70Q9BRQ4 267 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 APOOQ9BUR5 198 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 IQCGQ9H095 443 aaKnown RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 NEK6Q9HC98 313 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 SLC2A8Q9NY64 477 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 GNG12Q9UBI6 72 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 TUBGCP4Q9UGJ1 667 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 PPP2R2CQ9Y2T4 447 aa3.68□□□□□ -1.82
SCAF11-210ENST00000547654 MYH14Q7Z406 1995 aaKnown RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 PRDM15P57071 1507 aaPredicted RBP3.68□□□□□ -1.82
SCAF11-210ENST00000547654 NUP153P49790 1475 aaKnown RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 RALGAPBQ86X10 1494 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 CDC42BPBQ9Y5S2 1711 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 IGHV4-61A0A0C4DH41 118 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 LOC390937A0A1W2PQ73 354 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 SNTNA6NMZ2 147 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 ANHXE9PGG2 379 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 SPECC1L-ADORA2AF8WAN1 911 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 GOLGA8SH3BPF8 625 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 RNF13O43567 381 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TIMM8AO60220 97 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 PRKNO60260 465 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 ANGPTL1O95841 491 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TSPAN12O95859 305 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 IGHV4-59P01825 116 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 EDN1P05305 212 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TPSB2P20231 275 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 NMT1P30419 496 aaKnown RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 MAGEA1P43355 309 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 MAGEA5P43359 124 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 CCT3P49368 545 aaKnown RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TAF6P49848 677 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 RAG2P55895 527 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 RPL27P61353 136 aaKnown RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 GCKRQ14397 625 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TPSAB1Q15661 275 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TTC19Q6DKK2 380 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 CLEC2AQ6UVW9 174 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TMEM184AQ6ZMB5 413 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TUBA1AQ71U36 451 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 GPR137CQ8N3F9 429 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 PDCL2Q8N4E4 241 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 MARVELD2Q8N4S9 558 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 MAB21L3Q8N8X9 362 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 Q8N9G6 341 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 BPIFCQ8NFQ6 507 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 OR4C3Q8NH37 302 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 RPLP0P6Q8NHW5 317 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 FAM81AQ8TBF8 368 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 M1APQ8TC57 530 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 LIPHQ8WWY8 451 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TADA1Q96BN2 335 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 SDSLQ96GA7 329 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 C7orf34Q96L11 122 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 ZNF354BQ96LW1 612 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TSNARE1Q96NA8 513 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 AMDHD1Q96NU7 426 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 RBM14Q96PK6 669 aaKnown RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 COPS8Q99627 209 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TUBA1CQ9BQE3 449 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 SLC30A2Q9BRI3 323 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 PAPOLGQ9BWT3 736 aaKnown RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 TSSK1BQ9BXA7 367 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 STMN4Q9H169 189 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 ALG9Q9H6U8 611 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 MCCC2Q9HCC0 563 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 STARD5Q9NSY2 213 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 SMOXQ9NWM0 555 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 C2orf42Q9NWW7 574 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 DUS2Q9NX74 493 aaKnown RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 NLGN3Q9NZ94 848 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 EIF3KQ9UBQ5 218 aaKnown RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 PURGQ9UJV8 347 aaKnown RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 KLF2Q9Y5W3 355 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 RNF215Q9Y6U7 377 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 PTPRUQ92729 1446 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 MROH5Q6ZUA9 1318 aa3.67□□□□□ -1.82
SCAF11-210ENST00000547654 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-210ENST00000547654 PDE4DIPQ5VU43 2346 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 TMEM94Q12767 1356 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 GPATCH8Q9UKJ3 1502 aaKnown RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 CROCC2H7BZ55 1655 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 A0A1B0GVL5 298 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 LRIT2A6NDA9 550 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 OR5H15A6NDH6 313 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 BTN3A3O00478 584 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 EI24O14681 340 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 CASKO14936 926 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 SURF4O15260 269 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 SPOPO43791 374 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 CDH16O75309 829 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 STX11O75558 287 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 SORBS2O94875 1100 aaKnown RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 LRATO95237 230 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 SEC24AO95486 1093 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 RPLP0P05388 317 aaKnown RBP3.66□□□□□ -1.82
SCAF11-210ENST00000547654 ERVK-10P10266 1014 aa3.66□□□□□ -1.82
SCAF11-210ENST00000547654 POU2F1P14859 743 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms