RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 REV1Q9UBZ9 1251 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 CLEC2DQ9UHP7 191 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 CARD8Q9Y2G2 431 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 SNX5Q9Y5X3 404 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 PRKYO43930 277 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 BMP10O95393 424 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 ITGAMP11215 1152 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 LCN10Q6JVE6 187 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 IGFN1Q86VF2 1251 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 PEX5LQ8IYB4 626 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 GPR135Q8IZ08 494 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 OR51A7Q8NH64 312 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 BBS10Q8TAM1 723 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 SENP5Q96HI0 755 aaPredicted RBP11.09□□□□□ -0.63
CCDC38-202ENST00000546386 CNDP2Q96KP4 475 aaKnown RBP11.09□□□□□ -0.63
CCDC38-202ENST00000546386 SMAD5Q99717 465 aaKnown RBP11.09□□□□□ -0.63
CCDC38-202ENST00000546386 FUNDC2Q9BWH2 189 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 RTN4RQ9BZR6 473 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 UCK2Q9BZX2 261 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 GABARAPL1Q9H0R8 117 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 SMIM31A0A1B0GVY4 71 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 A0A1W2PPC1 479 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 DUX1O43812 170 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 SRPX2O60687 465 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-202ENST00000546386 STX11O75558 287 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 RFPL3O75679 317 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 ANXA8P13928 327 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 GNSP15586 552 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 GGT2P36268 569 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 RPS3AP61247 264 aaKnown RBP11.08□□□□□ -0.64
CCDC38-202ENST00000546386 ZXDAP98168 799 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 ST3GAL4Q11206 333 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 SLC36A4Q6YBV0 504 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 GDF7Q7Z4P5 450 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 C1orf210Q8IVY1 113 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 OR8D4Q8NGM9 314 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 GGHQ92820 318 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 TANKQ92844 425 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 TTTY10Q9BZA0 68 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 EPB41L1Q9H4G0 881 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 MED20Q9H944 212 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 FOLH1BQ9HBA9 442 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 RTTNQ86VV8 2226 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 TRAV27A0A087WT01 109 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 SMIM30A4D0T7 59 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 CLDN4O14493 209 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 AP3D1O14617 1153 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 NUDT21O43809 227 aaKnown RBP11.08□□□□□ -0.64
CCDC38-202ENST00000546386 TRMUO75648 421 aaKnown RBP11.08□□□□□ -0.64
CCDC38-202ENST00000546386 SOX30O94993 753 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 SLC35A2P78381 396 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 GINS1Q14691 196 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 ZBED5Q49AG3 693 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 ARHGAP40Q5TG30 622 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 OTPQ5XKR4 325 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 NATD1Q8N6N6 113 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 FAM174AQ8TBP5 190 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 SFXN5Q8TD22 340 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 FAR1Q8WVX9 515 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 SLC41A3Q96GZ6 507 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 ADOQ96SZ5 270 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 OR10A5Q9H207 317 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 PIGUQ9H490 435 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 MTHFD2LQ9H903 347 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-202ENST00000546386 RXFP3Q9NSD7 469 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 OCIAD1Q9NX40 245 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 KCND3Q9UK17 655 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 POFUT2Q9Y2G5 429 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 CSNK1G3Q9Y6M4 447 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 TP53BP1Q12888 1972 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-202ENST00000546386 AKAP13Q12802 2813 aa11.08□□□□□ -0.64
CCDC38-202ENST00000546386 ZNF292O60281 2723 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PMS2P1A4D2B8 440 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 AGAP5A6NIR3 686 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 WWP2O00308 870 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 SLC35E2P0CK97 266 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 CT45A8P0DMV1 189 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 CT45A9P0DMV2 189 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PCMT1P22061 227 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 RGS19P49795 217 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 UGT2B15P54855 530 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 POU6F2P78424 691 aaPredicted RBP11.07□□□□□ -0.64
CCDC38-202ENST00000546386 MADCAM1Q13477 382 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 SPCS2Q15005 226 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 RFX4Q33E94 735 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 CT45A2Q5DJT8 189 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PMS2CLQ68D20 193 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PWWP2BQ6NUJ5 590 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 OGFOD3Q6PK18 319 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 CBLN3Q6UW01 205 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 B3GNT6Q6ZMB0 384 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 C17orf82Q86X59 251 aaPredicted RBP11.07□□□□□ -0.64
CCDC38-202ENST00000546386 SNX29P2Q8IUI4 249 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PLXDC1Q8IUK5 500 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 MORN4Q8NDC4 146 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 PTPMT1Q8WUK0 201 aaPredicted RBP11.07□□□□□ -0.64
CCDC38-202ENST00000546386 EDAQ92838 391 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 OR5M11Q96RB7 305 aa11.07□□□□□ -0.64
CCDC38-202ENST00000546386 NDC1Q9BTX1 674 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms