RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 BRIX1Q8TDN6 353 aaKnown RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 COX14Q96I36 57 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 PRAP1Q96NZ9 151 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 OR7D2Q96RA2 312 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 ALG8Q9BVK2 526 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 MTG2Q9H4K7 406 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 HINT3Q9NQE9 182 aaKnown RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 GLTPQ9NZD2 209 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 EMC3Q9P0I2 261 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 ZFR2Q9UPR6 939 aaKnown RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 PRRC2BQ5JSZ5 2229 aaKnown RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 LRIT2A6NDA9 550 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 BTN3A3O00478 584 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 CH25HO95992 272 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 GCGRP47871 477 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 RGS8P57771 180 aaPredicted RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 ST8SIA6P61647 398 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 MLLT1Q03111 559 aaPredicted RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 TGM3Q08188 693 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 CCDC85BQ15834 202 aaPredicted RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 PIP5KL1Q5T9C9 394 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 SFXN4Q6P4A7 337 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 BAIAP2L2Q6UXY1 529 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 ADAMTSL4Q6UY14 1074 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 WASH2PQ6VEQ5 465 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 ZNF793Q6ZN11 406 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 ERN2Q76MJ5 926 aaKnown RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 NRMQ8IXM6 262 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 SAMD12Q8N8I0 201 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 ZNF680Q8NEM1 530 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 BBS1Q8NFJ9 593 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 OR11H7Q8NGC8 314 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 RADILQ96JH8 1075 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 C17orf62Q9BQA9 187 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 OR51J1Q9H342 316 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 NUDT15Q9NV35 164 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 MGAT4AQ9UM21 535 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 DNMT3AQ9Y6K1 912 aaPredicted RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 PTPRSQ13332 1948 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 SOCS6O14544 535 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 PLPP2O43688 288 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 LANCL1O43813 399 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 SOX30O94993 753 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 TFPIP10646 304 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 PSMB5P28074 263 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 TRHRP34981 398 aaPredicted RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 GPR4P46093 362 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 PRKAG1P54619 331 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 GALEQ14376 348 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 CEBPEQ15744 281 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ZIC1Q15915 447 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 TMEM52BQ4KMG9 183 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 KLHL12Q53G59 568 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 C6orf132Q5T0Z8 1188 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 METRNLQ641Q3 311 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 MRM1Q6IN84 353 aaKnown RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 MEPCEQ7L2J0 689 aaKnown RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 GDF7Q7Z4P5 450 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 FGD2Q7Z6J4 655 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 HMGN2P46Q86SG4 172 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 LRRTM4Q86VH4 590 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 VRK2Q86Y07 508 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 CPOQ8IVL8 374 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 NKAIN4Q8IVV8 208 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 AMER3Q8N944 861 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 TEX19Q8NA77 164 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 KREMEN2Q8NCW0 462 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 OR51G2Q8NGK0 314 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 SLC41A3Q96GZ6 507 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 MAP6Q96JE9 813 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 FCRL4Q96PJ5 515 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 YIPF4Q9BSR8 244 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 LINC00597Q9H2U6 94 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 SLCO1C1Q9NYB5 712 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ZNF624Q9P2J8 865 aaPredicted RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 RABL2AQ9UBK7 228 aaPredicted RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 RABL2BQ9UNT1 228 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 RASD1Q9Y272 281 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 GPR55Q9Y2T6 319 aaPredicted RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 CHST2Q9Y4C5 530 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 A0A0G2JK05 382 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 OR5K3A6NET4 321 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 SLC9A3R1O14745 358 aaPredicted RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 CCL16O15467 120 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 EEF1E1O43324 174 aaKnown RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 PQBP1O60828 265 aaKnown RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 UBL3O95164 117 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 AGR2O95994 175 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 MT-ND5P03915 603 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 TCRBP04435 133 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ADH1AP07327 375 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 IFI30P13284 250 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 ADRB3P13945 408 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 CSNK2A2P19784 350 aaPredicted RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 TSFMP43897 325 aaKnown RBP8.17□□□□□ -1.1
TDP1-204ENST00000545686 MMP15P51511 669 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 EPHA4P54764 986 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 PITPNAQ00169 270 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 HSF2Q03933 536 aa8.17□□□□□ -1.1
TDP1-204ENST00000545686 SLC36A2Q495M3 483 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms