RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GXYLT1Q4G148 440 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 ZNF385BQ569K4 471 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 WLSQ5T9L3 541 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 CPTPQ5TA50 214 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 AGBL2Q5U5Z8 902 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 ANKRD26P1Q6NSI1 321 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 LARP4Q71RC2 724 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 TRILQ7L0X0 811 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 FAM214BQ7L5A3 538 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 ZNF551Q7Z340 670 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 MRGPRGQ86SM5 289 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 CHERPQ8IWX8 916 aaKnown RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 LRRC34Q8IZ02 419 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 OR2L13Q8N349 312 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 ZNF808Q8N4W9 903 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 NUP43Q8NFH3 380 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 OR1J4Q8NGS1 313 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 RAB3IL1Q8TBN0 382 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 MGARPQ8TDB4 240 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 PHF10Q8WUB8 498 aaKnown RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 HGDQ93099 445 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 CIDECQ96AQ7 238 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 TLCD1Q96CP7 247 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 SLC35A4Q96G79 324 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 TMEM41AQ96HV5 264 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 NODALQ96S42 347 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 ADOQ96SZ5 270 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 SORT1Q99523 831 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 VKORC1Q9BQB6 163 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 OSBPL11Q9BXB4 747 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 C20orf27Q9GZN8 174 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 TP63Q9H3D4 680 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 ZNF703Q9H7S9 590 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 THAP1Q9NVV9 213 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 COQ3Q9NZJ6 369 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 GIMAP2Q9UG22 337 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 ATP6V1HQ9UI12 483 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 HAO1Q9UJM8 370 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 ACAD8Q9UKU7 415 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 CBLCQ9ULV8 474 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 FLNCQ14315 2725 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 PHF3Q92576 2039 aaKnown RBP6.73□□□□□ -1.33
CPSF7-224ENST00000544990 A0A1W2PRB8 838 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 PRAMEF25A6NGN4 478 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 LRRC3CA6NJW4 275 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 SLCO1B7G3V0H7 640 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 ZNHIT1O43257 154 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 TSPAN2O60636 221 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 WDR1O75083 606 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 NME6O75414 186 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-224ENST00000544990 CBR3O75828 277 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 SOX30O94993 753 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 KCNH1O95259 989 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 CLDN1O95832 211 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 HOXD4P09016 255 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-224ENST00000544990 RFPL3SP0C7P2 107 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 G6PDP11413 515 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 LBPP18428 481 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 GABRA3P34903 492 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 GCKP35557 465 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 PRIM2P49643 509 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 CLK3P49761 638 aaKnown RBP6.73□□□□□ -1.33
CPSF7-224ENST00000544990 PRKAG1P54619 331 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 CLDN8P56748 225 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 PPP2R2AP63151 447 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 PRR5P85299 388 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 GAB1Q13480 694 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 ART3Q13508 389 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 PTGR1Q14914 329 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 SF3B4Q15427 424 aaKnown RBP eCLIP6.73□□□□□ -1.333e-9■■■□□ 15.9
CPSF7-224ENST00000544990 CES4AQ5XG92 561 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 BICRALQ6AI39 1079 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 TIGD3Q6B0B8 471 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 ZNF585AQ6P3V2 769 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 ZCCHC12Q6PEW1 402 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 ANGPTL8Q6UXH0 198 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 NPSR1Q6W5P4 371 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 SZRD1Q7Z422 152 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 FGD2Q7Z6J4 655 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 CDRT4Q8N9R6 151 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 OR7A2PQ8NGA2 310 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 NEIL3Q8TAT5 605 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 ITLN2Q8WWU7 325 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-224ENST00000544990 OR5P2Q8WZ92 322 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 PPP1R36Q96LQ0 422 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 CCDC140Q96MF4 163 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 GNRHR2Q96P88 292 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 LMF2Q9BU23 707 aaKnown RBP6.73□□□□□ -1.33
CPSF7-224ENST00000544990 DPY30Q9C005 99 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 MANSC1Q9H8J5 431 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 EQTNQ9NQ60 294 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 SDHAF3Q9NRP4 125 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 ASIC5Q9NY37 505 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 CGGBP1Q9UFW8 167 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-224ENST00000544990 EMC9Q9Y3B6 208 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 LIPGQ9Y5X9 500 aa6.73□□□□□ -1.33
CPSF7-224ENST00000544990 NUP214P35658 2090 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-224ENST00000544990 NCOA6Q14686 2063 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-224ENST00000544990 C15orf38-AP3S2A0A0A6YYH1 394 aa6.72□□□□□ -1.33
CPSF7-224ENST00000544990 TRPC5OSA6NMA1 111 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms