RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 RTP2Q5QGT7 225 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 VASNQ6EMK4 673 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 DBX2Q6ZNG2 339 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 MSANTD1Q6ZTZ1 278 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 FGD2Q7Z6J4 655 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 THOC6Q86W42 341 aaKnown RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 NXPE1Q8N323 547 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 C12orf45Q8N5I9 185 aaPredicted RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 OR4K5Q8NGD3 323 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 TMEM19Q96HH6 336 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 SLC38A3Q99624 504 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 NKX6-2Q9C056 277 aaPredicted RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 RDH14Q9HBH5 336 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 MGAT4CQ9UBM8 478 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 KLF15Q9UIH9 416 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 OR6C75A6NL08 312 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 HEPACAM2A8MVW5 462 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 GCM2O75603 506 aaPredicted RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 KLHL18O94889 574 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 F11P03951 625 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 CSN2P05814 226 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 IL3P08700 152 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 ANKRD34CP0C6C1 535 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 OR12D1P0DN82 309 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 LIPCP11150 499 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 FUT1P19526 365 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 WNT3P56703 355 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 PPP3R1P63098 170 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 CD276Q5ZPR3 534 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 MZT2AQ6P582 158 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 CLDN22Q8N7P3 220 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 FAM46AQ96IP4 442 aaKnown RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 GPBP1L1Q9HC44 474 aaPredicted RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 SLC22A11Q9NSA0 550 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 DOCK6Q96HP0 2047 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 MYO16Q9Y6X6 1858 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 SLC38A8A6NNN8 435 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 WRBO00258 174 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 KHDRBS3O75525 346 aaKnown RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 PRKRAO75569 313 aaKnown RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 RAB36O95755 333 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 IL1AP01583 271 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 HLA-DQB1P01920 261 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 S100PP25815 95 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 MAGEB1P43366 347 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 WNT4P56705 351 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 SMAD3P84022 425 aaKnown RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 DGCR2P98153 550 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 SNTB2Q13425 540 aaKnown RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 SLBPQ14493 270 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 SYPL1Q16563 259 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 ADGRF1Q5T601 910 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 FAM198BQ6UWH4 519 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 ZNF730Q6ZMV8 503 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 APCDD1Q8J025 514 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 ZNF454Q8N9F8 522 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 UBTD2Q8WUN7 234 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 TMEM159Q96B96 161 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 MAPKAP1Q9BPZ7 522 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 ADAT1Q9BUB4 502 aaKnown RBP12.05□□□□□ -0.48
PDZD4-209ENST00000544474 CDCA4Q9BXL8 241 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 THSD1Q9NS62 852 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 MED9Q9NWA0 146 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 KCNK7Q9Y2U2 307 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 ENPP4Q9Y6X5 453 aa12.05□□□□□ -0.48
PDZD4-209ENST00000544474 ANKRD36A6QL64 1941 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 RTTNQ86VV8 2226 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 MPTX1A8MV57 137 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 TO15178 435 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 FGF2P09038 288 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 CD22P20273 847 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 PTAFRP25105 342 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 AOAHP28039 575 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 MTNR1AP48039 350 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 STARP49675 285 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 ANXA8L1Q5VT79 327 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 HAGHLQ6PII5 290 aaPredicted RBP12.04□□□□□ -0.48
PDZD4-209ENST00000544474 CRB3Q9BUF7 120 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 TAPBPLQ9BX59 468 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 PLA2G12AQ9BZM1 189 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 ISG20L2Q9H9L3 353 aaKnown RBP12.04□□□□□ -0.48
PDZD4-209ENST00000544474 SLCO1C1Q9NYB5 712 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 SCP2D1Q9UJQ7 156 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 GABRPO00591 440 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 HPXP02790 462 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 EIF4EP06730 217 aaKnown RBP12.04□□□□□ -0.48
PDZD4-209ENST00000544474 NMBP08949 121 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 PVALBP20472 110 aaPredicted RBP12.04□□□□□ -0.48
PDZD4-209ENST00000544474 VEGFCP49767 419 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 TAS2R41P59536 307 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 SIAH3Q8IW03 269 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 SYNPOQ8N3V7 929 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 OR8J1Q8NGP2 316 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 ELP4Q96EB1 424 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 SENP5Q96HI0 755 aaPredicted RBP12.04□□□□□ -0.48
PDZD4-209ENST00000544474 MCOLN1Q9GZU1 580 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 DPAGT1Q9H3H5 408 aa12.04□□□□□ -0.48
PDZD4-209ENST00000544474 MIOXQ9UGB7 285 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms