RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 DECR1Q16698 335 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 EOGTQ5NDL2 527 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 RTL6Q6ICC9 239 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 SLC39A5Q6ZMH5 540 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 CMTR2Q8IYT2 770 aaKnown RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 DEFB107AQ8IZN7 70 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 RTL3Q8N8U3 475 aaKnown RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 OR13F1Q8NGS4 319 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 TFAP2CQ92754 450 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 OR8B4Q96RC9 309 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 CPNE1Q99829 537 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 CCDC32Q9BV29 185 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 RUSC1Q9BVN2 902 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 COLEC11Q9BWP8 271 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 FAM83DQ9H4H8 585 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 MAGEL2Q9UJ55 1249 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 A3GALT2U3KPV4 340 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ARID2Q68CP9 1835 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 A0A1B0GVM2 712 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 FFAR3O14843 346 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 GPR42O15529 346 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 CSF2P04141 144 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 SRMP19623 302 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 MRPS10P82664 201 aaKnown RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 GABPAQ06546 454 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 INCA1Q0VD86 236 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 CYBRD1Q53TN4 286 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 PABPC1L2AQ5JQF8 200 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 PRAMEF17Q5VTA0 474 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF687Q8N1G0 1237 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 LMNTD1Q8N9Z9 388 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 OR13D1Q8NGV5 346 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF564Q8TBZ8 553 aaPredicted RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 LPAR2Q9HBW0 351 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 MYOZ2Q9NPC6 264 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 SS18L2Q9UHA2 77 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF222Q9UK12 451 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 PCDHB1Q9Y5F3 818 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 THSD7BQ9C0I4 1608 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 LRCH4O75427 683 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 TACR2P21452 398 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 MYF6P23409 242 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 CAPSQ13938 189 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 GCNT6Q5T4J0 391 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 MFSD4AQ8N468 514 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 FAM46DQ8NEK8 389 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 OR56B1Q8NGI3 324 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 CYB5D2Q8WUJ1 264 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 SLC7A6Q92536 515 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 DAZLQ92904 295 aaKnown RBP8.36□□□□□ -1.07
VPS13D-212ENST00000543766 MS4A4AQ96JQ5 239 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 SPATA33Q96N06 139 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF577Q9BSK1 485 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 EGLN1Q9GZT9 426 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 MMP28Q9H239 520 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 TCF7L1Q9HCS4 588 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 EQTNQ9NQ60 294 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 FOXJ2Q9P0K8 574 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 ANAPC7Q9UJX3 599 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 PPIEQ9UNP9 301 aaKnown RBP8.36□□□□□ -1.07
VPS13D-212ENST00000543766 PLIN4Q96Q06 1357 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 KITP10721 976 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 FCGR1AP12314 374 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 CPN1P15169 458 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 S100A11P31949 105 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 PMELP40967 661 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 RARRES1P49788 294 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 S100A10P60903 97 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 PDZK1IP1Q13113 114 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 AQP6Q13520 282 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 EXOSC2Q13868 293 aaKnown RBP8.36□□□□□ -1.07
VPS13D-212ENST00000543766 RAB30Q15771 203 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF284Q2VY69 593 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 SAMD13Q5VXD3 122 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 WDR5BQ86VZ2 330 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF444Q8N0Y2 327 aaPredicted RBP8.36□□□□□ -1.07
VPS13D-212ENST00000543766 COMMD1Q8N668 190 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 OR6N1Q8NGY5 312 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 LRTOMTQ8WZ04 291 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 DIO2Q92813 273 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 MARK4Q96L34 752 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 AIF1LQ9BQI0 150 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 DPH7Q9BTV6 452 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 EPHX3Q9H6B9 360 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 ERRFI1Q9UJM3 462 aaPredicted RBP8.36□□□□□ -1.07
VPS13D-212ENST00000543766 MRPS18BQ9Y676 258 aaKnown RBP8.36□□□□□ -1.07
VPS13D-212ENST00000543766 F5H5T6 163 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 OTX2P32243 289 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 NRG3P56975 720 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 CDC42EP1Q00587 391 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 NAAAQ02083 359 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 PTPN20Q4JDL3 420 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 PDZD11Q5EBL8 140 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 AHSA2Q719I0 299 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 SMIM20Q8N5G0 67 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 OR4C15Q8NGM1 316 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 OR52J3Q8NH60 311 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 RAB40AQ8WXH6 277 aa8.36□□□□□ -1.07
VPS13D-212ENST00000543766 RAB1CQ92928 201 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms