RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 C1GALT1Q9NS00 363 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 NAALAD2Q9Y3Q0 740 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 A0A0G2JPF8 293 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 HNRNPCL3B7ZW38 293 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 FOXE1O00358 373 aaPredicted RBP15.11■□□□□ 0.01
VARS2-212ENST00000542001 HNRNPCL4P0DMR1 293 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 HHEXQ03014 270 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 RPE65Q16518 533 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 JAGN1Q8N5M9 183 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 OR10H5Q8NGA6 315 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 RPLP0P6Q8NHW5 317 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 ZG16BQ96DA0 208 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 KLHDC7BQ96G42 594 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 GPER1Q99527 375 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 OR52D1Q9H346 318 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 CACNA1GO43497 2377 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 TVP23AA6NH52 213 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 PCP4L1A6NKN8 68 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 PRODHO43272 600 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 DOK2O60496 412 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 NTN1O95631 604 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 ZNF77Q15935 545 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 CTF1Q16619 201 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 MOSPD2Q8NHP6 518 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 POLMQ9NP87 494 aaPredicted RBP15.11■□□□□ 0.01
VARS2-212ENST00000542001 PADI2Q9Y2J8 665 aa15.11■□□□□ 0.01
VARS2-212ENST00000542001 SOX1O00570 391 aaPredicted RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 LSM11P83369 360 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■■■■□ 22.2
VARS2-212ENST00000542001 UBE2Q1Q7Z7E8 422 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 SYT9Q86SS6 491 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 PAK6Q9NQU5 681 aaPredicted RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 ARID2Q68CP9 1835 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 A0A1W2PR48 441 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 SCDO00767 359 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 FLRT2O43155 660 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 CLEC3AO75596 197 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 GPX5O75715 221 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 SEMA3DO95025 777 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 CPMP14384 443 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 JUNBP17275 347 aaPredicted RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 PDX1P52945 283 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 SEC23BQ15437 767 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 USP51Q70EK9 711 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 PRICKLE2Q7Z3G6 844 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 LINC00471Q8N535 108 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 NEDD4LQ96PU5 975 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 POLDIP3Q9BY77 421 aaKnown RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 MKRN2Q9H000 416 aaKnown RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 MTHFD2LQ9H903 347 aaPredicted RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 IER3IP1Q9Y5U9 82 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 ISPDA4D126 451 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 A8MVJ9 347 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 CSO75390 466 aaKnown RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 MAS1P04201 325 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 IL7P13232 177 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 CLDN12P56749 244 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 ARPC4P59998 168 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 PUS10Q3MIT2 529 aaKnown RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 TRMT12Q53H54 448 aaKnown RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 ZMAT1Q5H9K5 638 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 TECPR1Q7Z6L1 1165 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 ZER1Q7Z7L7 766 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 RIT1Q92963 219 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 ZSCAN32Q9NX65 697 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 SERGEFQ9UGK8 458 aa15.1■□□□□ 0.01
VARS2-212ENST00000542001 APOBEC3BQ9UH17 382 aaKnown RBP15.1■□□□□ 0.01
VARS2-212ENST00000542001 HTR3EA5X5Y0 456 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 SOBPA7XYQ1 873 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 C2orf74A8MZ97 194 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 DBIP07108 87 aaKnown RBP15.09■□□□□ 0.01
VARS2-212ENST00000542001 THEGLP0DJG4 465 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 SLC6A6P31641 620 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 RPA4Q13156 261 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 ALKBH2Q6NS38 261 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 FBXL6Q8N531 539 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 ASCC1Q8N9N2 400 aaKnown RBP15.09■□□□□ 0.01
VARS2-212ENST00000542001 ANKRD53Q8N9V6 530 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 OR2L3Q8NG85 312 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 NSMAFQ92636 917 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 PRRC1Q96M27 445 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 PELI2Q9HAT8 420 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 ZNF226Q9NYT6 803 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 ACTR10Q9NZ32 417 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 DKK3Q9UBP4 350 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 PCDHGA4Q9Y5G9 962 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 TRIM64CA6NLI5 447 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 FMO6PO60774 539 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 ZNF81P51508 661 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 LIM2P55344 173 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 CTBP2P56545 445 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 SCGB2B2Q4G0G5 96 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 MRPL2Q5T653 305 aaKnown RBP15.09■□□□□ 0.01
VARS2-212ENST00000542001 PGBD2Q6P3X8 592 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 LACC1Q8IV20 430 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 LYSMD2Q8IV50 215 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
VARS2-212ENST00000542001 DNAJC5GQ8N7S2 189 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 TMEM239Q8WW34 195 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 ZFYVE21Q9BQ24 234 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 LYARQ9NX58 379 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms