RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PAQR9Q6ZVX9 377 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 MOB2Q70IA6 237 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 CBWD2Q8IUF1 395 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 KLHDC8BQ8IXV7 354 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 RELL2Q8NC24 303 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 TRMT10AQ8TBZ6 339 aaKnown RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 TUBGCP3Q96CW5 907 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 AKR1E2Q96JD6 320 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 C4orf36Q96KX1 117 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 ZBTB18Q99592 522 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 APOOQ9BUR5 198 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 RBM24Q9BX46 236 aaKnown RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 MRPL13Q9BYD1 178 aaKnown RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 GCOM2Q9BZD3 368 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 LRRCC1Q9C099 1032 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 COA1Q9GZY4 146 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 CXXC4Q9H2H0 198 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 ELL3Q9HB65 397 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 SMPD3Q9NY59 655 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-217ENST00000541578 TUBGCP4Q9UGJ1 667 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 CTNNA3Q9UI47 895 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 CSNK1G3Q9Y6M4 447 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 WDR81Q562E7 1941 aa3.61□□□□□ -1.83
SNHG1-217ENST00000541578 SCN9AQ15858 1988 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 NCOR1O75376 2440 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 DOCK3Q8IZD9 2030 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 CCL15-CCL14A0A0B4J2E2 113 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 LOC390937A0A1W2PQ73 354 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 WASHC1A8K0Z3 465 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 PMS2P5A8MQ11 134 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 H3BMH7 237 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 NTN3O00634 580 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-217ENST00000541578 TSPAN2O60636 221 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 SDC3O75056 442 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 SPAG6O75602 509 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 STK17BO94768 372 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 CFC1BP0CG36 223 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 CFC1P0CG37 223 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 ADORA3P0DMS8 318 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 CYP11B1P15538 503 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 CD1DP15813 335 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 FCGR2CP31995 323 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 PEX19P40855 299 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 LEPRP48357 1165 aaKnown RBP3.6□□□□□ -1.83
SNHG1-217ENST00000541578 LINC01547P58512 204 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-217ENST00000541578 ERVK-16P61578 105 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 PDK3Q15120 406 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 CCL15Q16663 113 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 HLA-BQ31612 363 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 ANKRD55Q3KP44 614 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 ZNF528Q3MIS6 628 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 RABL6Q3YEC7 729 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-217ENST00000541578 RABGAP1LQ5R372 815 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 SPATA46Q5T0L3 261 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 CBLN3Q6UW01 205 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 Q7L0L9 218 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 COPS6Q7L5N1 327 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 RPAINQ86UA6 219 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 ITIH5Q86UX2 942 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 ARFGAP2Q8N6H7 521 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 EIF1ADQ8N9N8 165 aaKnown RBP3.6□□□□□ -1.83
SNHG1-217ENST00000541578 OR52B6Q8NGF0 335 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 OR52J3Q8NH60 311 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 MRGPRDQ8TDS7 321 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 PCNPQ8WW12 178 aaKnown RBP3.6□□□□□ -1.83
SNHG1-217ENST00000541578 P3H4Q92791 437 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 OPTNQ96CV9 577 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 PLIN2Q99541 437 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 CLEC7AQ9BXN2 247 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 NFKBIZQ9BYH8 718 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 DHX33Q9H6R0 707 aaKnown RBP3.6□□□□□ -1.83
SNHG1-217ENST00000541578 SPHK2Q9NRA0 654 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 KLRF1Q9NZS2 232 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 GHRLQ9UBU3 117 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 SEC14L4Q9UDX3 406 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 MRPS33Q9Y291 106 aaKnown RBP3.6□□□□□ -1.83
SNHG1-217ENST00000541578 SPACA6W5XKT8 324 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 NEDD4P46934 1319 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 UBN2Q6ZU65 1347 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 SYNRGQ9UMZ2 1314 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 LAMB4A4D0S4 1761 aa3.6□□□□□ -1.83
SNHG1-217ENST00000541578 RANBP2P49792 3224 aaKnown RBP3.6□□□□□ -1.83
SNHG1-217ENST00000541578 HTTP42858 3142 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 LRRC37AA6NMS7 1700 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 A0A1W2PR80 420 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 MSGN1A6NI15 193 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 C15orf61A6NNL5 157 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 A8MU76 341 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 PPIAL4DF5H284 164 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 K7ERI5 159 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 AP3B1O00203 1094 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 CYB561D2O14569 222 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 CASKO14936 926 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 TNFSF12O43508 249 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 DCXO43602 365 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 TPST2O60704 377 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 ADCY5O95622 1261 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 AMBPP02760 352 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 PRSS56P0CW18 603 aa3.59□□□□□ -1.83
SNHG1-217ENST00000541578 AOC1P19801 751 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms