RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 EIPR1Q53HC9 387 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 VWA2Q5GFL6 755 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 COLEC12Q5KU26 742 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 USP51Q70EK9 711 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 TMEM151BQ8IW70 566 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 ZNF615Q8N8J6 731 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 PTPMT1Q8WUK0 201 aaPredicted RBP15.67■□□□□ 0.1
COPS3-212ENST00000539941 PIK3R3Q92569 461 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 CLIP3Q96DZ5 547 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 BARD1Q99728 777 aaKnown RBP15.67■□□□□ 0.1
COPS3-212ENST00000539941 ARHGDIGQ99819 225 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 YTHDF1Q9BYJ9 559 aaKnown RBP15.67■□□□□ 0.1
COPS3-212ENST00000539941 QRSL1Q9H0R6 528 aaKnown RBP15.67■□□□□ 0.1
COPS3-212ENST00000539941 TOR3AQ9H497 397 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 EVA1AQ9H8M9 152 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 KIF17Q9P2E2 1029 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 MKLN1Q9UL63 735 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 CFL2Q9Y281 166 aa15.67■□□□□ 0.1
COPS3-212ENST00000539941 ZNF443Q9Y2A4 671 aaPredicted RBP15.67■□□□□ 0.1
COPS3-212ENST00000539941 ASCC3Q8N3C0 2202 aaKnown RBP15.66■□□□□ 0.1
COPS3-212ENST00000539941 RALGAPA1Q6GYQ0 2036 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 NINQ8N4C6 2090 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 EFCAB7A8K855 629 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 J3KTA2 159 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 HRKO00198 91 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 KCNK2O95069 426 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 EPPINO95925 133 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 ANXA8P13928 327 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 DAPP51397 102 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 OCA2Q04671 838 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 MICAQ29983 383 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 ZNF385CQ66K41 422 aaPredicted RBP15.66■□□□□ 0.1
COPS3-212ENST00000539941 DEF8Q6ZN54 512 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 VRK2Q86Y07 508 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 ZNF555Q8NEP9 628 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 OR4D11Q8NGI4 311 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 OR14A16Q8NHC5 309 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 C16orf52Q8NHV5 167 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 VANGL1Q8TAA9 524 aaPredicted RBP15.66■□□□□ 0.1
COPS3-212ENST00000539941 PHF10Q8WUB8 498 aaKnown RBP15.66■□□□□ 0.1
COPS3-212ENST00000539941 TSLPQ969D9 159 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 VN1R1Q9GZP7 353 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 Q9N2J8 555 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 PNO1Q9NRX1 252 aaKnown RBP15.66■□□□□ 0.1
COPS3-212ENST00000539941 SLC22A11Q9NSA0 550 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 OCIAD1Q9NX40 245 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 DLL3Q9NYJ7 618 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 CLCA3PQ9Y6N3 262 aa15.66■□□□□ 0.1
COPS3-212ENST00000539941 TRIM64A6NGJ6 449 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 CDX4O14627 284 aaPredicted RBP15.65■□□□□ 0.1
COPS3-212ENST00000539941 FFAR1O14842 300 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 TIAF1O95411 115 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 CLPSP04118 112 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 H1F0P07305 194 aaKnown RBP15.65■□□□□ 0.1
COPS3-212ENST00000539941 CYC1P08574 325 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 ITGAMP11215 1152 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 CD59P13987 128 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 CCKBRP32239 447 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 LAPTM4AQ15012 233 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 NSDHLQ15738 373 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 EXOC3L2Q2M3D2 409 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 B3GNT8Q7Z7M8 397 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 COMTD1Q86VU5 262 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 TAGAPQ8N103 731 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 BMPERQ8N8U9 685 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 ATG16L2Q8NAA4 619 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 SLC38A9Q8NBW4 561 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 PIK3C3Q8NEB9 887 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 OR10G2Q8NGC3 310 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 STT3BQ8TCJ2 826 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 DAZLQ92904 295 aaKnown RBP15.65■□□□□ 0.1
COPS3-212ENST00000539941 ZG16BQ96DA0 208 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 SENP5Q96HI0 755 aaPredicted RBP15.65■□□□□ 0.1
COPS3-212ENST00000539941 PRRC1Q96M27 445 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 SLC46A1Q96NT5 459 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 MBOAT4Q96T53 435 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 NMNAT1Q9HAN9 279 aaPredicted RBP15.65■□□□□ 0.1
COPS3-212ENST00000539941 FBXO8Q9NRD0 319 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 FAM118AQ9NWS6 357 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 CTSFQ9UBX1 484 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 MKL2Q9ULH7 1088 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 CARD8Q9Y2G2 431 aa15.65■□□□□ 0.1
COPS3-212ENST00000539941 GXYLT2A0PJZ3 443 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 M0R3H8 397 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 POLR1CO15160 346 aaPredicted RBP15.64■□□□□ 0.09
COPS3-212ENST00000539941 SLC16A6O15403 523 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 LRP3O75074 770 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 CPNE3O75131 537 aaKnown RBP15.64■□□□□ 0.09
COPS3-212ENST00000539941 IL7RP16871 459 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 MC2RQ01718 297 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 KCNAB2Q13303 367 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 IL18R1Q13478 541 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 GANABQ14697 944 aaKnown RBP15.64■□□□□ 0.09
COPS3-212ENST00000539941 GPR68Q15743 365 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 RSPO4Q2I0M5 234 aaPredicted RBP15.64■□□□□ 0.09
COPS3-212ENST00000539941 ZIK1Q3SY52 487 aaPredicted RBP15.64■□□□□ 0.09
COPS3-212ENST00000539941 CCNJQ5T5M9 372 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 LACC1Q8IV20 430 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 LSM14AQ8ND56 463 aaKnown RBP15.64■□□□□ 0.09
COPS3-212ENST00000539941 OR6T1Q8NGN1 323 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms