RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 INHBBP09529 407 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 UROSP10746 265 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 FCGR2AP12318 317 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 GABRA3P34903 492 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 MAP3K8P41279 467 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 DNAJB13P59910 316 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 PRR5P85299 388 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 HSPB3Q12988 150 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 FGFBP1Q14512 234 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 GRAMD1BQ3KR37 738 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 APOOLQ6UXV4 268 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 ZNF551Q7Z340 670 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-206ENST00000538970 GGNQ86UU5 652 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 LRRC75A-AS1Q8N1F1 130 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 SPATA3Q8NHX4 192 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 PIK3R3Q92569 461 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 GFM2Q969S9 779 aaKnown RBP11.25□□□□□ -0.61
VAMP1-206ENST00000538970 ARSGQ96EG1 525 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 PIK3IP1Q96FE7 263 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 ZNF764Q96H86 408 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-206ENST00000538970 METTL2AQ96IZ6 378 aaKnown RBP11.25□□□□□ -0.61
VAMP1-206ENST00000538970 EGLN2Q96KS0 407 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 MARK4Q96L34 752 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 PIP5K1AQ99755 562 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 SLC39A3Q9BRY0 314 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 C3orf14Q9HBI5 128 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 EQTNQ9NQ60 294 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 PTGDR2Q9Y5Y4 395 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 AP4B1Q9Y6B7 739 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 FN1P02751 2386 aaKnown RBP11.25□□□□□ -0.61
VAMP1-206ENST00000538970 MPDZO75970 2070 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 SHISA8B8ZZ34 492 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 C16orf97H3BN30 126 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 GMFGO60234 142 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 AQP8O94778 261 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 NKX2-2O95096 273 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 PRPS2P11908 318 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 ZNF17P17021 662 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 ADSLP30566 484 aaPredicted RBP11.24□□□□□ -0.61
VAMP1-206ENST00000538970 KCNJ5P48544 419 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 RPS3AP61247 264 aaKnown RBP11.24□□□□□ -0.61
VAMP1-206ENST00000538970 C17orf67Q0P5P2 114 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 CCDC153Q494R4 210 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 CFAP157Q5JU67 520 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 Q5PR19 223 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 CLEC6AQ6EIG7 209 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 ANKRD26P1Q6NSI1 321 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 FAM214BQ7L5A3 538 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 ZNF550Q7Z398 422 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 GSPT2Q8IYD1 628 aaKnown RBP11.24□□□□□ -0.61
VAMP1-206ENST00000538970 CEP112Q8N8E3 955 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 ZNF610Q8N9Z0 462 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 GPR151Q8TDV0 419 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 CIDECQ96AQ7 238 aaPredicted RBP11.24□□□□□ -0.61
VAMP1-206ENST00000538970 FCRL1Q96LA6 429 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 HS3ST6Q96QI5 342 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 CCT7Q99832 543 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 OXSMQ9NWU1 459 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 PROCRQ9UNN8 238 aa11.24□□□□□ -0.61
VAMP1-206ENST00000538970 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 ALG1L2C9J202 215 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 ARHGEF9O43307 516 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 TBX19O60806 448 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 SMPD2O60906 423 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 SEC22BO75396 215 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 OXSR1O95747 527 aaPredicted RBP11.23□□□□□ -0.61
VAMP1-206ENST00000538970 SHBGP04278 402 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 NGFRP08138 427 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 SDC1P18827 310 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 FPR1P21462 350 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 LOXP28300 417 aaPredicted RBP11.23□□□□□ -0.61
VAMP1-206ENST00000538970 GPC1P35052 558 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 PDE7AQ13946 482 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 ACKR1Q16570 336 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 SGCBQ16585 318 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 VPS26BQ4G0F5 336 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 ZNF385BQ569K4 471 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 C22orf34Q6ZV56 151 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 GALNT10Q86SR1 603 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 EXOC3L1Q86VI1 746 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 CDRT4Q8N9R6 151 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 OR2T11Q8NH01 316 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 ZFP28Q8NHY6 868 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 CAVIN3Q969G5 261 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 PIGTQ969N2 578 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 GIMAP5Q96F15 307 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 ADGRG7Q96K78 797 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 CCL19Q99731 98 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 RHOXF2Q9BQY4 288 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 C12orf65Q9H3J6 166 aaKnown RBP11.23□□□□□ -0.61
VAMP1-206ENST00000538970 UBTD1Q9HAC8 227 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 LRTM1Q9HBL6 345 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 C1orf109Q9NX04 203 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 VDAC3Q9Y277 283 aa11.23□□□□□ -0.61
VAMP1-206ENST00000538970 A0A087WZY1 265 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 C7orf72A4D263 438 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 KIF2AO00139 706 aaPredicted RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 SLC28A1O00337 649 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 EIF1AYO14602 144 aaKnown RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 RGS14O43566 566 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms