RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LCORQ96JN0 433 aaPredicted RBP6.69□□□□□ -1.34
MSH6-209ENST00000538136 SPATA5L1Q9BVQ7 753 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 LHPPQ9H008 270 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 REEP1Q9H902 201 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 SERINC1Q9NRX5 453 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 KRT84Q9NSB2 600 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CENPMQ9NSP4 180 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 C14orf105Q9NVL8 296 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 WNK1Q9H4A3 2382 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 NYNRINQ9P2P1 1898 aaKnown RBP6.69□□□□□ -1.34
MSH6-209ENST00000538136 LY6G6EA0A0G2JKS1 128 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 A0A1W2PP18 115 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 KLRC4-KLRK1H3BQV0 150 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CBFA2T3O75081 653 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 SNX4O95219 450 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 ANGPTL1O95841 491 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 ZNF883P0CG24 379 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 BMP7P18075 431 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 MEP1AQ16819 746 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 SMU1Q2TAY7 513 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 SAMD4BQ5PRF9 694 aaKnown RBP6.69□□□□□ -1.34
MSH6-209ENST00000538136 DCST1Q5T197 706 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 MAVSQ7Z434 540 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 RBM45Q8IUH3 476 aaKnown RBP6.69□□□□□ -1.34
MSH6-209ENST00000538136 OFCC1Q8IZS5 231 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 WDR20Q8TBZ3 569 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 ROBO4Q8WZ75 1007 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 ZPBPQ9BS86 351 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 TRIM15Q9C019 465 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 FBXO8Q9NRD0 319 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 DNAJC27Q9NZQ0 273 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 UPB1Q9UBR1 384 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 U3KQA8 63 aa6.69□□□□□ -1.34
MSH6-209ENST00000538136 CCDC88CQ9P219 2028 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 K7EM74 188 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 SULT2B1O00204 365 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 UPK1AO00322 258 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 IFNW1P05000 195 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 SLC35E2P0CK97 266 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 HK1P19367 917 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 GRPRP30550 384 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 CD96P40200 585 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 GPR4P46093 362 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 MAN2A2P49641 1150 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 AIMP2Q13155 320 aaKnown RBP6.68□□□□□ -1.34
MSH6-209ENST00000538136 SLC10A1Q14973 349 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 FAM98BQ52LJ0 330 aaKnown RBP6.68□□□□□ -1.34
MSH6-209ENST00000538136 MTX3Q5HYI7 312 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 RP9Q8TA86 221 aaKnown RBP6.68□□□□□ -1.34
MSH6-209ENST00000538136 CNOT9Q92600 299 aaKnown RBP6.68□□□□□ -1.34
MSH6-209ENST00000538136 ROPN1LQ96C74 230 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 THAP11Q96EK4 314 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 SPSB2Q99619 263 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 GAL3ST1Q99999 423 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 SLC22A11Q9NSA0 550 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 TOR4AQ9NXH8 423 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 MSRB2Q9Y3D2 182 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 FAM220BPB1ANY3 271 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 PTGES3LE9PB15 166 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 RNF13O43567 381 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 HCN1O60741 890 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 UTS2O95399 124 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 AHSA1O95433 338 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 SYNGR4O95473 234 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 DCTP40126 519 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 PIGFQ07326 219 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 MAP4K2Q12851 820 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 RCN1Q15293 331 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 TAF13Q15543 124 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 ENPP6Q6UWR7 440 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 MAMSTRQ6ZN01 415 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 CDRT4Q8N9R6 151 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 PSD4Q8NDX1 1056 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 OR14A16Q8NHC5 309 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 ZNF354BQ96LW1 612 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 TUBA1CQ9BQE3 449 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 RBM24Q9BX46 236 aaKnown RBP6.68□□□□□ -1.34
MSH6-209ENST00000538136 COQ3Q9NZJ6 369 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 MYOTQ9UBF9 498 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 TMED5Q9Y3A6 229 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 ZNF726A6NNF4 738 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 H0YIG0 161 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 CXCL13O43927 109 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 DOK2O60496 412 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 F13BP05160 661 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 IFI30P13284 250 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 FPR1P21462 350 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 DNAJA1P31689 397 aaKnown RBP6.68□□□□□ -1.34
MSH6-209ENST00000538136 RPS5P46782 204 aaKnown RBP6.68□□□□□ -1.34
MSH6-209ENST00000538136 POLE2P56282 527 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 SGCAQ16586 387 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 DMRTC1Q5HYR2 192 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 ALG10BQ5I7T1 473 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 PRAMEF8Q5VWM4 474 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 PRAMEF7Q5VXH5 474 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 SLC30A6Q6NXT4 461 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 CBLN3Q6UW01 205 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 RETREG3Q86VR2 466 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 ACTRT2Q8TDY3 377 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 ACTRT3Q9BYD9 372 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms