RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ACSF3Q4G176 576 aaPredicted RBP11.95□□□□□ -0.5
PRKDC-206ENST00000536429 NXNQ6DKJ4 435 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 TMEM211Q6ICI0 200 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 CDC73Q6P1J9 531 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 ZCCHC12Q6PEW1 402 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 PLXDC2Q6UX71 529 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 LIX1LQ8IVB5 337 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 NATD1Q8N6N6 113 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 GATSQ8NAP1 163 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 OR4K17Q8NGC6 315 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 OR56A1Q8NGH5 318 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 OR5D16Q8NGK9 328 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 OR4A15Q8NGL6 344 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 OR5M1Q8NGP8 315 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 OR14L1PQ8NHC6 308 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 SFXN5Q8TD22 340 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 DUSP19Q8WTR2 217 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 RND1Q92730 232 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 TESCQ96BS2 214 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 MAELQ96JY0 434 aaKnown RBP11.95□□□□□ -0.5
PRKDC-206ENST00000536429 ACTRT3Q9BYD9 372 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 VIPAS39Q9H9C1 493 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 NEUROD4Q9HD90 331 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 ARGLU1Q9NWB6 273 aaPredicted RBP11.95□□□□□ -0.5
PRKDC-206ENST00000536429 GIN1Q9NXP7 522 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 Q9UFV3 132 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 DKKL1Q9UK85 242 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 MRTO4Q9UKD2 239 aaKnown RBP11.95□□□□□ -0.5
PRKDC-206ENST00000536429 CAMK2AQ9UQM7 478 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 FBN2P35556 2912 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 FREM3P0C091 2139 aa11.95□□□□□ -0.5
PRKDC-206ENST00000536429 RNF103-CHMP3A0A140T963 221 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 NKX2-6A6NCS4 301 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 TRPC5OSA6NMA1 111 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 SHISA8B8ZZ34 492 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 E9PBE3 544 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 TOXO94900 526 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 CPSF4O95639 269 aaKnown RBP11.94□□□□□ -0.5
PRKDC-206ENST00000536429 ANGPTL1O95841 491 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 SNRPB2P08579 225 aaKnown RBP11.94□□□□□ -0.5
PRKDC-206ENST00000536429 PRF1P14222 555 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 DPP4P27487 766 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 PSMD4P55036 377 aaKnown RBP11.94□□□□□ -0.5
PRKDC-206ENST00000536429 POU6F2P78424 691 aaPredicted RBP11.94□□□□□ -0.5
PRKDC-206ENST00000536429 ACAD11Q709F0 780 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 OLIG3Q7RTU3 272 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 C6orf120Q7Z4R8 191 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 SPATA19Q7Z5L4 167 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 NAXEQ8NCW5 288 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 OR10Q1Q8NGQ4 319 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 PIWIL2Q8TC59 973 aaKnown RBP11.94□□□□□ -0.5
PRKDC-206ENST00000536429 CA5BP1Q8WTZ4 195 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 OR7D2Q96RA2 312 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 STACQ99469 402 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 BTBD2Q9BX70 525 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 TBL1XR1Q9BZK7 514 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 PIGUQ9H490 435 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 DUSP22Q9NRW4 184 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 COQ3Q9NZJ6 369 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 USH1CQ9Y6N9 552 aa11.94□□□□□ -0.5
PRKDC-206ENST00000536429 NUP214P35658 2090 aaPredicted RBP11.94□□□□□ -0.5
PRKDC-206ENST00000536429 PRSS51A0A1B0GVH4 220 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 HMGB1P1B2RPK0 211 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-206ENST00000536429 ALG1L2C9J202 215 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 SLCO1B7G3V0H7 640 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 DIAPH2O60879 1101 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 GABRA1P14867 456 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 TBXA2RP21731 343 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 CHRNB4P30926 498 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 CDKN2CP42773 168 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 LHX2P50458 406 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 CLNS1AP54105 237 aaKnown RBP11.93□□□□□ -0.5
PRKDC-206ENST00000536429 DSCR4P56555 118 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-206ENST00000536429 SRYQ05066 204 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 CD226Q15762 336 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 DCST2Q5T1A1 773 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 ARSKQ6UWY0 536 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 IFNEQ86WN2 208 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 TNIP2Q8NFZ5 429 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 LILRB4Q8NHJ6 448 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 LRRC8CQ8TDW0 803 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 ACTRT2Q8TDY3 377 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 ADAMTS15Q8TE58 950 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 MOAP1Q96BY2 351 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 C7orf26Q96N11 449 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 SFXN2Q96NB2 322 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 NPAS1Q99742 590 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 TUBA1CQ9BQE3 449 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 INPP5KQ9BT40 448 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 G6PC3Q9BUM1 346 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 ZNF446Q9NWS9 450 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 FAF1Q9UNN5 650 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-206ENST00000536429 PCDHGB3Q9Y5G1 929 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 TEX15Q9BXT5 2789 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 DCHS2Q6V1P9 2916 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 PKDREJQ9NTG1 2253 aa11.93□□□□□ -0.5
PRKDC-206ENST00000536429 CACNA1CQ13936 2221 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 ABCA12Q86UK0 2595 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 IGLV3-32A0A0A0MS00 114 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 CENPVL1A0A0U1RR11 272 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms