RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 SGK494L7N484 410 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 TGFB1P01137 390 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 ADRB1P08588 477 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 GIFP27352 417 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 SEC13P55735 322 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 MLLT11Q13015 90 aaPredicted RBP13.11□□□□□ -0.31
LIG1-203ENST00000536218 RUNX3Q13761 415 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 LRIF1Q5T3J3 769 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 OR2G6Q5TZ20 316 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 FAM198BQ6UWH4 519 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 FAM83HQ6ZRV2 1179 aaPredicted RBP13.11□□□□□ -0.31
LIG1-203ENST00000536218 RFT1Q96AA3 541 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 OTULINQ96BN8 352 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 SENP5Q96HI0 755 aaPredicted RBP13.11□□□□□ -0.31
LIG1-203ENST00000536218 SLC38A3Q99624 504 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 RPP25Q9BUL9 199 aaKnown RBP13.11□□□□□ -0.31
LIG1-203ENST00000536218 SFXN1Q9H9B4 322 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 DNAH14Q0VDD8 3507 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 GSAPA4D1B5 854 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 H3BN98 237 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 KAT7O95251 611 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
LIG1-203ENST00000536218 ANXA4P09525 319 aaPredicted RBP13.11□□□□□ -0.31
LIG1-203ENST00000536218 LAMP1P11279 417 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 OPRD1P41143 372 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 PDGFRLQ15198 375 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 TCTE1Q5JU00 501 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 PTOV1Q86YD1 416 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 ZNF740Q8NDX6 193 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 WDR20Q8TBZ3 569 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 GATAD2BQ8WXI9 593 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 LGR4Q9BXB1 951 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 ZCCHC2Q9C0B9 1178 aaKnown RBP13.11□□□□□ -0.31
LIG1-203ENST00000536218 DPAGT1Q9H3H5 408 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 POMT2Q9UKY4 750 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 SPTBN5Q9NRC6 3674 aaKnown RBP13.1□□□□□ -0.31
LIG1-203ENST00000536218 A0A1B0GVI7 797 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 MID1O15344 667 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 S100A6P06703 90 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 DRD5P21918 477 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 SELENOPP49908 381 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 CCR6P51684 374 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 TCEA2Q15560 299 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 ST3GAL2Q16842 350 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 IL20RBQ6UXL0 311 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 SERPINA11Q86U17 422 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 NANOGP1Q8N7R0 232 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 ZNF527Q8NB42 609 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 GANCQ8TET4 914 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 TSSK6Q9BXA6 273 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 TBC1D17Q9HA65 648 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 ASIC5Q9NY37 505 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 NLGN3Q9NZ94 848 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 NFKBIL1Q9UBC1 381 aaPredicted RBP13.1□□□□□ -0.31
LIG1-203ENST00000536218 DOCK9Q9BZ29 2069 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 TRPM6Q9BX84 2022 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 C7orf66A4D0T2 115 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 EPOPA6NHQ4 379 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 ANXA2P2A6NMY6 339 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 TLR4O00206 839 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 LATO43561 262 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 PTPN6P29350 595 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 RAB13P51153 203 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 SLBPQ14493 270 aaKnown RBP eCLIP13.1□□□□□ -0.31
LIG1-203ENST00000536218 ZFP82Q8N141 532 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 CSGALNACT1Q8TDX6 532 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 NSMAFQ92636 917 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 OR2M2Q96R28 347 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 EVA1AQ9H8M9 152 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 SLC22A11Q9NSA0 550 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 SLC23A2Q9UGH3 650 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 PRUNE2Q8WUY3 3088 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 MEIKINA0A087WXM9 373 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 TTLL8A6PVC2 850 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 C1QTNF3-AMACRE9PGA6 284 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 ABCD4O14678 606 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 GNB5O14775 395 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 YY2O15391 372 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 LILRB5O75023 590 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 PAK4O96013 591 aaPredicted RBP13.1□□□□□ -0.31
LIG1-203ENST00000536218 TCRBP04435 133 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 ACPPP15309 386 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 NPPBP16860 134 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 ELK1P19419 428 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 ACADLP28330 430 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 GDI1P31150 447 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 UNC5DQ6UXZ4 953 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 FAM46DQ8NEK8 389 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 OR5T2Q8NGG2 359 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 OR5AR1Q8NGP9 310 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 OR56A3Q8NH54 315 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 HGDQ93099 445 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 TMED9Q9BVK6 235 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 NKX2-4Q9H2Z4 354 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 BIN3Q9NQY0 253 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 OR1A2Q9Y585 309 aa13.1□□□□□ -0.31
LIG1-203ENST00000536218 KNL1Q8NG31 2342 aa13.09□□□□□ -0.31
LIG1-203ENST00000536218 MGAT4DA6NG13 374 aa13.09□□□□□ -0.31
LIG1-203ENST00000536218 AIPO00170 330 aa13.09□□□□□ -0.31
LIG1-203ENST00000536218 TO15178 435 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms