RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SNX8Q9Y5X2 465 aa11.96□□□□□ -0.49
CLSTN3-205ENST00000535452 NCKAP5O14513 1909 aa11.96□□□□□ -0.5
CLSTN3-205ENST00000535452 SPG11Q96JI7 2443 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 OR2M5A3KFT3 312 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 SMIM23A6NLE4 172 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 ZIC3O60481 467 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 SOX30O94993 753 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 UTS2O95399 124 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 NUDT14O95848 222 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 KRT16P08779 473 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 INHBBP09529 407 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 ALOX5P09917 674 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 ZNF17P17021 662 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 TBXA2RP21731 343 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 ECHS1P30084 290 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 UGT2B10P36537 528 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 NR1H2P55055 460 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 CLDN15P56746 228 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 DNAJB13P59910 316 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 FAM27E3Q08E93 113 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 TP53BP2Q13625 1128 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 UBAP2Q5T6F2 1119 aaKnown RBP11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 ZCCHC12Q6PEW1 402 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 CLEC9AQ6UXN8 241 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 FRMD7Q6ZUT3 714 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 FAM214BQ7L5A3 538 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 MARCH3Q86UD3 253 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 DDIASQ8IXT1 998 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 LRRC75A-AS1Q8N1F1 130 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 COX18Q8N8Q8 333 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 FADS6Q8N9I5 356 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 OR6Y1Q8NGX8 325 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 FNDC9Q8TBE3 224 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 STARD4Q96DR4 205 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 MS4A4EQ96PG1 132 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 PIP5K1AQ99755 562 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 TACO1Q9BSH4 297 aaKnown RBP11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 LMF2Q9BU23 707 aaKnown RBP11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 NGBQ9NPG2 151 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 ATAD3AQ9NVI7 634 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 VDAC3Q9Y277 283 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 ZNF337Q9Y3M9 751 aa11.95□□□□□ -0.5
CLSTN3-205ENST00000535452 HIVEP1P15822 2718 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 AZIN1O14977 448 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 CTIFO43310 598 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 NME6O75414 186 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 TNFSF13O75888 250 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 LCN1P31025 176 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 CRHR1P34998 444 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 SOX18P35713 384 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 EIF1P41567 113 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 PPP2R2BQ00005 443 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 SPDYE7PQ495Y7 208 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 Q5PR19 223 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 VWA1Q6PCB0 445 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 LRIG3Q6UXM1 1119 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 BEND4Q6ZU67 534 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 NATD1Q8N6N6 113 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 NUP43Q8NFH3 380 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 OR6K3Q8NGY3 331 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 MTERF3Q96E29 417 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 POM121Q96HA1 1249 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 GMPPAQ96IJ6 420 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 CCT7Q99832 543 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 OPN3Q9H1Y3 402 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 CXorf56Q9H5V9 222 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 REEP4Q9H6H4 257 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 RNF122Q9H9V4 155 aa11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 FAF1Q9UNN5 650 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-205ENST00000535452 EXPH5Q8NEV8 1989 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 FADS1O60427 444 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 FESP07332 822 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 CD53P19397 219 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 CRYGSP22914 178 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 GAS1P54826 345 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 FOXA1P55317 472 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 IFFO1Q0D2I5 559 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 ACKR1Q16570 336 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 GALNTL6Q49A17 601 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 BEX5Q5H9J7 111 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 TMEM201Q5SNT2 666 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 BHLHB9Q6PI77 547 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 PLXDC2Q6UX71 529 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 ESPNLQ6ZVH7 1005 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 BTLAQ7Z6A9 289 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 METTL25Q8N6Q8 603 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 OR5M1Q8NGP8 315 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 TMEM171Q8WVE6 324 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 FIG4Q92562 907 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 WFIKKN1Q96NZ8 548 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 HOXD1Q9GZZ0 328 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 UBQLN4Q9NRR5 601 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 ACSS1Q9NUB1 689 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 OXSMQ9NWU1 459 aa11.93□□□□□ -0.5
CLSTN3-205ENST00000535452 FREM3P0C091 2139 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 ABCA4P78363 2273 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 GTPBP1O00178 669 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms