RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NEUROG3Q9Y4Z2 214 aa0.15□□□□□ -2.39
COPB1-212ENST00000534771 COL11A1P12107 1806 aaPredicted RBP0.15□□□□□ -2.39
COPB1-212ENST00000534771 GRIN2DO15399 1336 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 A0A0A6YYC8 382 aaPredicted RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 SMIM28A0A1B0GU29 152 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 SDR42E2A6NKP2 422 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 YDJCA8MPS7 323 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 I3L1I5 382 aaPredicted RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 K7ENP7 123 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 K7N7A8 449 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CTDSPLO15194 276 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 SELENOFO60613 162 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 HCN1O60741 890 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 EIF3JO75822 258 aaKnown RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 KIAA0754O94854 1291 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 IGSF6O95976 241 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 SLC4A1P02730 911 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 GLAP06280 429 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CT45A8P0DMV1 189 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CT45A9P0DMV2 189 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 PPIAL4GP0DN37 164 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 B4GALT1P15291 398 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 WARSP23381 471 aaKnown RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 AQP1P29972 269 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 GCKP35557 465 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 KIR2DS2P43631 304 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 KIR2DS4P43632 304 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 ACADSBP45954 432 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 NMUP48645 174 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CRISP3P54108 245 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CSNK1G2P78368 415 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 EIF2B1Q14232 305 aaKnown RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 NFE2L1Q14494 772 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 COG2Q14746 738 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 ATXN7L3Q14CW9 347 aaPredicted RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 RAB35Q15286 201 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 ACKR1Q16570 336 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CT45A2Q5DJT8 189 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CASC10Q5T4H9 136 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CASC4Q6P4E1 433 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CLEC4GQ6UXB4 293 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 MSANTD1Q6ZTZ1 278 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 ARMCX2Q7L311 632 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 GDPD3Q7L5L3 318 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 PRPF39Q86UA1 669 aaKnown RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 PARGQ86W56 976 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 PCP2Q8IVA1 136 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 PEX5LQ8IYB4 626 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 COLGALT1Q8NBJ5 622 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 Q8NDZ9 215 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 OR52I1Q8NGK6 324 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 OR6M1Q8NGM8 313 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 ZNF461Q8TAF7 563 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 DLX4Q92988 240 aaPredicted RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 ATP6V0A1Q93050 837 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 FAM46BQ96A09 425 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 EXOSC8Q96B26 276 aaKnown RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 LRRC58Q96CX6 371 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 C11orf24Q96F05 449 aaPredicted RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 PDXPQ96GD0 296 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 CXorf58Q96LI9 332 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 NAA11Q9BSU3 229 aaPredicted RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 APOOQ9BUR5 198 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 TEX13AQ9BXU3 409 aaPredicted RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 ZDHHC6Q9H6R6 413 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 BLOC1S4Q9NUP1 217 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 NSMCE4AQ9NXX6 385 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 NRBP1Q9UHY1 535 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 UBQLN1Q9UMX0 589 aaKnown RBP0.14□□□□□ -2.39
COPB1-212ENST00000534771 GPR132Q9UNW8 380 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 EXOC7Q9UPT5 735 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 DHRS7Q9Y394 339 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 TUBGCP6Q96RT7 1819 aa0.14□□□□□ -2.39
COPB1-212ENST00000534771 PDS5BQ9NTI5 1447 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 A0A087X0K7 114 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 FAM149AA5PLN7 773 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 SULT2B1O00204 365 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 CFLARO15519 480 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 SDC3O75056 442 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 ENTPD5O75356 428 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 REC8O95072 547 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 MPZL1O95297 269 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 GGPS1O95749 300 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 CD55P08174 381 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 GIPP09681 153 aaPredicted RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 CCDC175P0C221 793 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 POLR2MP0CAP2 368 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 GLULP15104 373 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 PGAM1P18669 254 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 CCNA2P20248 432 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 MAT2AP31153 395 aaKnown RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 STIP1P31948 543 aaKnown RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 RDXP35241 583 aaKnown RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 SOAT1P35610 550 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 RPL4P36578 427 aaKnown RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 STARP49675 285 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 STK19P49842 368 aaPredicted RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 EFNB2P52799 333 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 KCNK10P57789 538 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 ADARB1P78563 741 aaKnown RBP0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms