RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ABCD2Q9UBJ2 740 aa8.49□□□□□ -1.05
SF3B2-216ENST00000534765 C1orf196B1AJZ1 125 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 PRSS23O95084 383 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 TXNDC12O95881 172 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 HK1P19367 917 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ACSL1P33121 698 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 CTBP2P56545 445 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 RAB5BP61020 215 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 POLR2LP62875 67 aaKnown RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 GAS6Q14393 721 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 NTRK2Q16620 822 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 IDNKQ5T6J7 187 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 MSRB3Q8IXL7 192 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 WDR20Q8TBZ3 569 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 C10orf90Q96M02 699 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 KLHL15Q96M94 604 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 BBS4Q96RK4 519 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 BTBD1Q9H0C5 482 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 KCNK12Q9HB15 430 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 PCDHGA2Q9Y5H1 932 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 EML5Q05BV3 1969 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 TMEM200CA6NKL6 621 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 CASC3O15234 703 aaKnown RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 GPX5O75715 221 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 EIF3GO75821 320 aaKnown RBP eCLIP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 NCR1O76036 304 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 CCNDBP1O95273 360 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 LPLP06858 475 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ACPPP15309 386 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 CD53P19397 219 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 POU3F2P20265 443 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 NPR2P20594 1047 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 DGKAP23743 735 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 PRKAR1BP31321 381 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 GNPDA1P46926 289 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 IRF4Q15306 451 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 P2RY14Q15391 338 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 MLF2Q15773 248 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ATAT1Q5SQI0 421 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 SHQ1Q6PI26 577 aaKnown RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 NUDT18Q6ZVK8 323 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 OR8D1Q8WZ84 308 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 UCN3Q969E3 161 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ZDHHC5Q9C0B5 715 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ESRP2Q9H6T0 727 aaKnown RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 LDAHQ9H6V9 325 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 CLN6Q9NWW5 311 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 PPT2Q9UMR5 302 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ADAMDEC1O15204 470 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 FARS2O95363 451 aaKnown RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 GBAP04062 536 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ALPPP05187 535 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 THEGLP0DJG4 465 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 UROSP10746 265 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ACADMP11310 421 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 IGFBP4P22692 258 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 S100PP25815 95 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 DAPP51397 102 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 CLCNKAP51800 687 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ST8SIA6P61647 398 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF79Q15937 498 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 FBXO43Q4G163 708 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ZER1Q7Z7L7 766 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 RDH10Q8IZV5 341 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 HDDC3Q8N4P3 179 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 KIAA1958Q8N8K9 716 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF480Q8WV37 535 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 AP3S1Q92572 193 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 OR52E6Q96RD3 313 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 SLC38A3Q99624 504 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 VRK1Q99986 396 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 TMEM138Q9NPI0 162 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 AIG1Q9NVV5 245 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 STOX2Q9P2F5 926 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 EXTL2Q9UBQ6 330 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ENTPD4Q9Y227 616 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 GSTK1Q9Y2Q3 226 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 FKBP7Q9Y680 259 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 SCN2AQ99250 2005 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 MDC1Q14676 2089 aaKnown RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 TRABD2BA6NFA1 517 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF705EA8MWA4 302 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 GTPBP1O00178 669 aaKnown RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 IFRD1O00458 451 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-216ENST00000534765 SIGLEC6O43699 453 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 RP2O75695 350 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 STATHP02808 62 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF35P13682 527 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 PTBP1P26599 531 aaKnown RBP eCLIP8.48□□□□□ -1.054e-7■■□□□ 13.9
SF3B2-216ENST00000534765 ITGA1P56199 1179 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 SPIBQ01892 262 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 AP5B1Q2VPB7 878 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ITPRIPL2Q3MIP1 535 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 SFRP5Q5T4F7 317 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF621Q6ZSS3 439 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 SLC44A3Q8N4M1 653 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 TMEM145Q8NBT3 493 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 TMEM185AQ8NFB2 350 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 OR11H4Q8NGC9 324 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms