RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	RPL3L	Q92901	407 aa	Known RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	ERGIC2	Q96RQ1	377 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	CCNL2	Q96S94	520 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	SH3GL1	Q99961	368 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	CITED1	Q99966	193 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	C11orf70	Q9BRQ4	267 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	CHRDL1	Q9BU40	450 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	ERVK-6	Q9BXR3	956 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	TRIM9	Q9C026	710 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	XKR8	Q9H6D3	395 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	DHX33	Q9H6R0	707 aa	Known RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	LPAR2	Q9HBW0	351 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	APOBEC3G	Q9HC16	384 aa	Known RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	SMOX	Q9NWM0	555 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	PIGL	Q9Y2B2	252 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979		V9GYY5	206 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	CD163L1	Q9NR16	1453 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	ROCK2	O75116	1388 aa	Known RBP	4.05	□□□□□ -1.76
ATM-223	ENST00000533979	AKAP12	Q02952	1782 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	KIF7	Q2M1P5	1343 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	LOC101059948	A0A1B0GTJ6	334 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979		A0A1B0GTQ1	180 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	HEATR9	A2RTY3	570 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979		A8MVM7	634 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	SPECC1L-ADORA2A	F8WAN1	911 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979		H3BTX0	84 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	FPGT	O14772	594 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	ALOX15B	O15296	676 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	P2RX6	O15547	441 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	ARHGEF9	O43307	516 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	SMC2	O95347	1197 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	OR8G3P	P0DMU2	310 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	TPSB2	P20231	275 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	MSH3	P20585	1137 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	NF2	P35240	595 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	MATK	P42679	507 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	MAGEA1	P43355	309 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	SEC61G	P60059	68 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	LGALS3BP	Q08380	585 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	CNTN1	Q12860	1018 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	TPSAB1	Q15661	275 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	STK11	Q15831	433 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	CDKN3	Q16667	212 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	PARP6	Q2NL67	630 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	ZNF699	Q32M78	642 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	LRRC37A5P	Q49AS3	106 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	FBXO48	Q5FWF7	155 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	SPANXN2	Q5MJ10	180 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	CTSL3P	Q5NE16	218 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	DCAF10	Q5QP82	559 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	C10orf120	Q5SQS8	335 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	SMIM5	Q71RC9	77 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	DPY19L4	Q7Z388	723 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	PARG	Q86W56	976 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	PAQR7	Q86WK9	346 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	GPBP1	Q86WP2	473 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	PLD3	Q8IV08	490 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	KRT222	Q8N1A0	295 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	GPR137C	Q8N3F9	429 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	SPEM1	Q8N4L4	309 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	TEX26	Q8N6G2	289 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	WDSUB1	Q8N9V3	476 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	SPATA4	Q8NEY3	305 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	OR2T12	Q8NG77	320 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	GPR148	Q8TDV2	347 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	NXPE2	Q96DL1	559 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	AKR1E2	Q96JD6	320 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	C12orf66	Q96MD2	445 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	C17orf77	Q96MU5	243 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	SHARPIN	Q9H0F6	387 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	VCPKMT	Q9H867	229 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	NEK6	Q9HC98	313 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	STARD5	Q9NSY2	213 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	UFSP2	Q9NUQ7	469 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	UBAP1	Q9NZ09	502 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	TAAR2	Q9P1P5	351 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	DBF4	Q9UBU7	674 aa	Predicted RBP	4.05	□□□□□ -1.76
ATM-223	ENST00000533979	USP54	Q70EL1	1684 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	LMO7	Q8WWI1	1683 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	ADAMTS7	Q9UKP4	1686 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.05	□□□□□ -1.76
ATM-223	ENST00000533979	SLIT3	O75094	1523 aa		4.05	□□□□□ -1.76
ATM-223	ENST00000533979	PPIP5K1	Q6PFW1	1433 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	SNED1	Q8TER0	1413 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	COL18A1	P39060	1754 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	CPD	O75976	1380 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979		A0A087WUV0	522 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM-223	ENST00000533979	OR2AG2	A6NM03	316 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	SNTN	A6NMZ2	147 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979		H0YL77	283 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	BTN3A3	O00478	584 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	CCS	O14618	274 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	SH2D1B	O14796	132 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	OTC	P00480	354 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	SERPINB2	P05120	415 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	ALPI	P09923	528 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	RNF224	P0DH78	156 aa		4.04	□□□□□ -1.76
ATM-223	ENST00000533979	CAPN2	P17655	700 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms