RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 SLC44A3Q8N4M1 653 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 MYCT1Q8N699 235 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 C15orf54Q8N8G6 183 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 AGBL3Q8NEM8 1001 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 OR1N1Q8NGS0 311 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 OR5J2Q8NH18 312 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 MCFD2Q8NI22 146 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 ACTL9Q8TC94 416 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 BRI3BPQ8WY22 251 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 AP3S1Q92572 193 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 LPAR1Q92633 364 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SLC38A4Q969I6 547 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 FAF2Q96CS3 445 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 CMBLQ96DG6 245 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 ASB9Q96DX5 294 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 OR2A14Q96R47 310 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 CRAMP1Q96RY5 1269 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 NIPSNAP1Q9BPW8 284 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 VKORC1Q9BQB6 163 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 MESP1Q9BRJ9 268 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 ZNF426Q9BUY5 554 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 CNPPD1Q9BV87 410 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 CDC42EP4Q9H3Q1 356 aaKnown RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 MUC13Q9H3R2 512 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 TRABDQ9H4I3 376 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 RANGRFQ9HD47 186 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 CCNB1IP1Q9NPC3 277 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 ABCB10Q9NRK6 738 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 ZFP57Q9NU63 452 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 TMEM248Q9NWD8 314 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 DDIT4Q9NX09 232 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 BARHL2Q9NY43 387 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 VNN3Q9NY84 501 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 JKAMPQ9P055 326 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 TMEM181Q9P2C4 612 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 STOX2Q9P2F5 926 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 IFT80Q9P2H3 777 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 SEC14L3Q9UDX4 400 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 CLCA2Q9UQC9 943 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SLCO1B1Q9Y6L6 691 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 FRMPD1Q5SYB0 1578 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 KIAA0556O60303 1618 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 CHD4Q14839 1912 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 ROBO3Q96MS0 1386 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 COL3A1P02461 1466 aaPredicted RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 LAMB1P07942 1786 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 KIF1BO60333 1816 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ARHGAP5Q13017 1502 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CCDC187A0A096LP49 1063 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 TCRBV21S2A2A0A5A6 115 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 TCRBV3S1A0A5B6 114 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CIB4A0PJX0 185 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 PI4KAP2A4QPH2 592 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 TRAPPC13A5PLN9 417 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 METTL21EPA6NDL7 271 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 NEMP2A6NFY4 417 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 MGAT4DA6NG13 374 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CLCA1A8K7I4 914 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ZNF785A8K8V0 405 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 D6RAR5 112 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 POC1B-GALNT4F8VUJ3 575 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 LGALS8O00214 317 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CLIC1O00299 241 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 SYT5O00445 386 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 SEPT4O43236 478 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 NCR1O76036 304 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 MLYCDO95822 493 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 FADS2O95864 444 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 HPRP00739 348 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 IFNA21P01568 189 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 MT-ND5P03915 603 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 IFI30P13284 250 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 FOSL2P15408 326 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 AGAP20933 346 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 PTNP21246 168 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 FGFR4P22455 802 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CA4P22748 312 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 GCSHP23434 173 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 EEF1B2P24534 225 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 MYL9P24844 172 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 AVPR2P30518 371 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 GGT5P36269 586 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 PTGFRP43088 359 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 MAGEA3P43357 314 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CAMLGP49069 296 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ACOT2P49753 483 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 NUMBP49757 651 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 DNA2P51530 1060 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 JAK3P52333 1124 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 RAG2P55895 527 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 YPEL5P62699 121 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 EIF5AP63241 154 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 CXADRP78310 365 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 SPIBQ01892 262 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.14□□□□□ -1.59
CD44-236ENST00000533222 TRAF3Q13114 568 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 GAB1Q13480 694 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 EXOSC2Q13868 293 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 GK2Q14410 553 aaPredicted RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 TWISTNBQ3B726 338 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms