RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 YIPF4Q9BSR8 244 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 HHATLQ9HCP6 504 aa15.62■□□□□ 0.09
PHRF1-204ENST00000532550 ZCCHC3Q9NUD5 404 aaKnown RBP15.62■□□□□ 0.09
PHRF1-204ENST00000532550 CLCA1A8K7I4 914 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 B4DXG7 233 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 CFLARO15519 480 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 ANGPTL1O95841 491 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 HMGN2P05204 90 aaKnown RBP15.61■□□□□ 0.09
PHRF1-204ENST00000532550 G6PDP11413 515 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 PEX19P40855 299 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 CCT3P49368 545 aaKnown RBP15.61■□□□□ 0.09
PHRF1-204ENST00000532550 ASCL1P50553 236 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 AGFG1P52594 562 aaKnown RBP15.61■□□□□ 0.09
PHRF1-204ENST00000532550 DIO3P55073 304 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 DLX5P56178 289 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 STX3Q13277 289 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 MPP2Q14168 576 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 PDCD2Q16342 344 aaPredicted RBP15.61■□□□□ 0.09
PHRF1-204ENST00000532550 BCL2A1Q16548 175 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 DUSP5Q16690 384 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 SPDYE7PQ495Y7 208 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 HHATQ5VTY9 493 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 RAET1LQ5VY80 246 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 FIGNL1Q6PIW4 674 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 KIRREL3Q8IZU9 778 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 COX18Q8N8Q8 333 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 FAM110BQ8TC76 370 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 JADE3Q92613 823 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 WNT2BQ93097 391 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 RTN4RQ9BZR6 473 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 BHLHE41Q9C0J9 482 aaPredicted RBP15.61■□□□□ 0.09
PHRF1-204ENST00000532550 AKTIPQ9H8T0 292 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 SIRT3Q9NTG7 399 aaPredicted RBP15.61■□□□□ 0.09
PHRF1-204ENST00000532550 NOP53Q9NZM5 478 aaKnown RBP15.61■□□□□ 0.09
PHRF1-204ENST00000532550 KIAA1549Q9HCM3 1950 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 TACC2O95359 2948 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 FBN2P35556 2912 aa15.61■□□□□ 0.09
PHRF1-204ENST00000532550 MPDZO75970 2070 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 LINC01387J3KSC0 135 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 NDUFB5O43674 189 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 ERLIN1O75477 346 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 SOX30O94993 753 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 KCNK2O95069 426 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 C6orf47O95873 294 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 IL18BPO95998 194 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 TMIGD3P0DMS9 266 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-204ENST00000532550 HPGDP15428 266 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 ZNF708P17019 499 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 TBXA2RP21731 343 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 BGNP21810 368 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 CLDN8P56748 225 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 CLDN18P56856 261 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 EEFSECP57772 596 aaKnown RBP15.6■□□□□ 0.09
PHRF1-204ENST00000532550 B3GALT5-AS1P59052 145 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 KRTAP10-9P60411 292 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.6■□□□□ 0.09
PHRF1-204ENST00000532550 PGS1Q32NB8 556 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 POMZP3Q6PJE2 187 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 APOOLQ6UXV4 268 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 GALNT10Q86SR1 603 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 RIMKLAQ8IXN7 391 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 C9orf106Q8NAJ2 232 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 RELL2Q8NC24 303 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-204ENST00000532550 OR56A1Q8NGH5 318 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 OR4C3Q8NH37 302 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 GOT1L1Q8NHS2 421 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-204ENST00000532550 NUDT8Q8WV74 236 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 RNASE6Q93091 150 aaKnown RBP15.6■□□□□ 0.09
PHRF1-204ENST00000532550 ZFP3Q96NJ6 502 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 UCN2Q96RP3 112 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 PIGQQ9BRB3 760 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 G6PC3Q9BUM1 346 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 DUSP26Q9BV47 211 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 BTBD2Q9BX70 525 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 C20orf27Q9GZN8 174 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 FOXD3Q9UJU5 478 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-204ENST00000532550 FAF1Q9UNN5 650 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-204ENST00000532550 POLQO75417 2590 aa15.6■□□□□ 0.09
PHRF1-204ENST00000532550 MED12LQ86YW9 2145 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 ALG1L2C9J202 215 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 GMFGO60234 142 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 RCBTB2O95199 551 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 POU3F2P20265 443 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-204ENST00000532550 LCN1P31025 176 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 KIR2DL3P43628 341 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 POU6F2P78424 691 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-204ENST00000532550 TP53BP2Q13625 1128 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 LASP1Q14847 261 aaKnown RBP15.59■□□□□ 0.09
PHRF1-204ENST00000532550 GLYR1Q49A26 553 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-204ENST00000532550 ADGRE4PQ86SQ3 457 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 UBQLNLQ8IYU4 475 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 MEIOBQ8N635 442 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 ANKRD42Q8N9B4 389 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 PSMA8Q8TAA3 256 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 ADAMTS15Q8TE58 950 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 MOAP1Q96BY2 351 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 C1GALT1C1Q96EU7 318 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 OTUB1Q96FW1 271 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-204ENST00000532550 STACQ99469 402 aa15.59■□□□□ 0.09
PHRF1-204ENST00000532550 ACTRT3Q9BYD9 372 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms