RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 SFXN2Q96NB2 322 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 ZNF599Q96NL3 588 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 CHP1Q99653 195 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 GGACTQ9BVM4 153 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 ANGPTL4Q9BY76 406 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 EGLN1Q9GZT9 426 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 NMNAT1Q9HAN9 279 aaPredicted RBP5.23□□□□□ -1.57
CD44-231ENST00000531110 SLC28A3Q9HAS3 691 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 SNTG1Q9NSN8 517 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 AKAP7Q9P0M2 348 aaPredicted RBP5.23□□□□□ -1.57
CD44-231ENST00000531110 TRPC4Q9UBN4 977 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 HEY2Q9UBP5 337 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 PEF1Q9UBV8 284 aaKnown RBP5.23□□□□□ -1.57
CD44-231ENST00000531110 ZNF639Q9UID6 485 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 OR52A1Q9UKL2 312 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 SSR3Q9UNL2 185 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 CA5BQ9Y2D0 317 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 SLC6A5Q9Y345 797 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 CDK5RAP2Q96SN8 1893 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 MYO5BQ9ULV0 1848 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 MYO3AQ8NEV4 1616 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 TOPBP1Q92547 1522 aa5.23□□□□□ -1.57
CD44-231ENST00000531110 EDC4Q6P2E9 1401 aaKnown RBP5.23□□□□□ -1.57
CD44-231ENST00000531110 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 TMEM238C9JI98 176 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 FAM86B1E9PN63 330 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 H7C417 338 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 K7EP13 123 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 AIPO00170 330 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 GRM8O00222 908 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 ADAM10O14672 748 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 PRMT5O14744 637 aaPredicted RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 BCAT2O15382 392 aaPredicted RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 DLEU1O43261 78 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 LRRTM2O43300 516 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 SLC28A2O43868 658 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 GATBO75879 557 aaKnown RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 SUPT7LO94864 414 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 IFNA17P01571 189 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 IFNB1P01574 187 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 HLA-DQA2P01906 255 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 WNT1P04628 370 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 MMP3P08254 477 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 ARSBP15848 533 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 MUC1P15941 1255 aaPredicted RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 ERCC2P18074 760 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 TYMPP19971 482 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 ANXA7P20073 488 aaKnown RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 HSD11B1P28845 292 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 GJC1P36383 396 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 CSKP41240 450 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 SLC11A1P49279 550 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 PRKXP51817 358 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 NUDT6P53370 316 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 RAD23AP54725 363 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 NAGLUP54802 743 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 CASP6P55212 293 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 ATP5IP56385 69 aaPredicted RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 CLDN8P56748 225 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 CDC42P60953 191 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 RAB5BP61020 215 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 RPS8P62241 208 aaKnown RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 RBX1P62877 108 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 DCDP81605 110 aaKnown RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 PPARDQ03181 441 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 PDIA2Q13087 525 aaKnown RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 SNTB1Q13884 538 aaKnown RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 RPS6KA1Q15418 735 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 ADIPOQQ15848 244 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 SLC5A12Q1EHB4 618 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 ASTE1Q2TB18 679 aaPredicted RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 MIDNQ504T8 468 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 AKIRIN2Q53H80 203 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 TCP11X2Q5H9J9 407 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 NHSL2Q5HYW2 709 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 C9orf64Q5T6V5 341 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 SLC9C2Q5TAH2 1124 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 MFSD14CQ5VZR4 134 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 BSPRYQ5W0U4 402 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 METTL7BQ6UX53 244 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 STRADAQ7RTN6 431 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 MYPOPQ86VE0 399 aaPredicted RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 KLBQ86Z14 1044 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 C10orf107Q8IVU9 208 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 DDIASQ8IXT1 998 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 GPR65Q8IYL9 337 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 FAM185AQ8N0U4 392 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 C9orf62Q8N4C0 152 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 RASGEF1AQ8N9B8 481 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 ACBD4Q8NC06 268 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 DBF4BQ8NFT6 615 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 OR2T34Q8NGX1 318 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 OR2T3Q8NH03 318 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 SCARB1Q8WTV0 552 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 ART4Q93070 314 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 CREB3L1Q96BA8 519 aa5.22□□□□□ -1.57
CD44-231ENST00000531110 NSUN4Q96CB9 384 aaKnown RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 KTI12Q96EK9 354 aaPredicted RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 BSCL2Q96G97 398 aaPredicted RBP5.22□□□□□ -1.57
CD44-231ENST00000531110 ZC3HAV1LQ96H79 300 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms