RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 CAVIN1Q6NZI2 390 aaKnown RBP6.17□□□□□ -1.42
CSDE1-213ENST00000530784 SYVN1Q86TM6 617 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 LUZP1Q86V48 1076 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 AMZ2Q86W34 360 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 OOSP2Q86WS3 158 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 VSIG1Q86XK7 387 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 TMEM126BQ8IUX1 230 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 RASGEF1AQ8N9B8 481 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 DDHD1Q8NEL9 900 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 SENP5Q96HI0 755 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-213ENST00000530784 RUFY1Q96T51 708 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 ANP32EQ9BTT0 268 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 SLC25A23Q9BV35 468 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 GHITMQ9H3K2 345 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 TRABDQ9H4I3 376 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 IL26Q9NPH9 171 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 FGF21Q9NSA1 209 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 PSMD13Q9UNM6 376 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 EXO1Q9UQ84 846 aaKnown RBP6.17□□□□□ -1.42
CSDE1-213ENST00000530784 TLN1Q9Y490 2541 aaKnown RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 UNC13CQ8NB66 2214 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 OR2AG2A6NM03 316 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 GOLGA6L19H0YKK7 550 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 TPPPO94811 219 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 SLC35G4P0C7Q5 338 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 PTPN3P26045 913 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 PBLDP30039 288 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 HNRNPH3P31942 346 aaKnown RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 CHAF1BQ13112 559 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 ITGA9Q13797 1035 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 TUBB2AQ13885 445 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 NFE2L1Q14494 772 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 CHRNA6Q15825 494 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 NADK2Q4G0N4 442 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 TEX44Q53QW1 395 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 GPRC6AQ5T6X5 926 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 LRRC38Q5VT99 294 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 FAM205BPQ63HN1 556 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 FAM53AQ6NSI3 398 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 FAM199XQ6PEV8 388 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 FAM151BQ6UXP7 276 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 CERS6Q6ZMG9 384 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 BZW1Q7L1Q6 419 aaKnown RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 GLT6D1Q7Z4J2 308 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 MCEMP1Q8IX19 187 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 TTC30BQ8N4P2 665 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 DTX3LQ8TDB6 740 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 BLOC1S5Q8TDH9 187 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 TFB1MQ8WVM0 346 aaKnown RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 MR1Q95460 341 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 FAM120BQ96EK7 910 aaKnown RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 DDOQ99489 341 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 MAP3K3Q99759 626 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 SRSF8Q9BRL6 282 aaKnown RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 TUBB2BQ9BVA1 445 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 ING2Q9H160 280 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 AKIRIN1Q9H9L7 192 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 FANCEQ9HB96 536 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 SMOXQ9NWM0 555 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 HRASLS2Q9NWW9 162 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 SOHLH2Q9NX45 425 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 HACD3Q9P035 362 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 KLHL8Q9P2G9 620 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 FAM153AQ9UHL3 310 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 SNX7Q9UNH6 387 aa6.16□□□□□ -1.42
CSDE1-213ENST00000530784 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.16□□□□□ -1.42
CSDE1-213ENST00000530784 LOC285095A0A1B0GVY8 99 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 SYCE3A1L190 88 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 OR6C74A6NCV1 312 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 SPOPO43791 374 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 UGT1A9O60656 530 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 SORBS2O94875 1100 aaKnown RBP6.15□□□□□ -1.42
CSDE1-213ENST00000530784 LDLRP01130 860 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 EPOP01588 193 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 TPM3P06753 285 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 KLK3P07288 261 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-213ENST00000530784 GNAZP19086 355 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 UGT1A6P19224 532 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 HLA-DPA1P20036 260 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 UGT1A4P22310 534 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 SLC1A1P43005 524 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 CCL11P51671 97 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 GSDMDP57764 484 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 GNB1P62873 340 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 PRKAA1Q13131 559 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 TFDP2Q14188 446 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 KRT33BQ14525 404 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 SLC1A5Q15758 541 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 TMEM220Q6QAJ8 160 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 KDELC1Q6UW63 502 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 MFSD7Q6UXD7 560 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 DET1Q7L5Y6 550 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 IPMKQ8NFU5 416 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 SSC4DQ8WTU2 575 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 C12orf66Q96MD2 445 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 VAT1Q99536 393 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 HGH1Q9BTY7 390 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 WWP1Q9H0M0 922 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 KIR3DX1Q9H7L2 352 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 UGT1A7Q9HAW7 530 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms