RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 UTS2O95399 124 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 H6PDO95479 791 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 WDPCPO95876 746 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 SP1P08047 785 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ETFAP13804 333 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ITGA2P17301 1181 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 NME2P22392 152 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 PGM1P36871 562 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 DCTP40126 519 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 CD96P40200 585 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 EIF1P41567 113 aaKnown RBP7.29□□□□□ -1.24
SSBP3-211ENST00000528787 HTR3AP46098 478 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 CPA2P48052 419 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 NCALDP61601 193 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 COPZ1P61923 177 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 KLRB1Q12918 225 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 SRSF6Q13247 344 aaKnown RBP7.29□□□□□ -1.24
SSBP3-211ENST00000528787 CBFBQ13951 182 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 COL9A2Q14055 689 aaPredicted RBP7.29□□□□□ -1.24
SSBP3-211ENST00000528787 GPR68Q15743 365 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF141Q15928 474 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 NNATQ16517 81 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ZSCAN26Q16670 478 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF766Q5HY98 468 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 RNF220Q5VTB9 566 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 FIGNL1Q6PIW4 674 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 NPSR1Q6W5P4 371 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 CCDC80Q76M96 950 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 SLC22A16Q86VW1 577 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 IFNEQ86WN2 208 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 CALHM3Q86XJ0 350 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ARMC8Q8IUR7 673 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF321PQ8N8H1 164 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 RBM15BQ8NDT2 890 aaKnown RBP7.29□□□□□ -1.24
SSBP3-211ENST00000528787 FBXO30Q8TB52 745 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 WDR60Q8WVS4 1066 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 PIK3R3Q92569 461 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 PROX1Q92786 737 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 RAB8BQ92930 207 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 EXTL1Q92935 676 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 FAM162AQ96A26 154 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 PNPLA2Q96AD5 504 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 EFHD2Q96C19 240 aaPredicted RBP7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ASB9Q96DX5 294 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 AURKBQ96GD4 344 aaPredicted RBP7.29□□□□□ -1.24
SSBP3-211ENST00000528787 C16orf58Q96GQ5 468 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ABHD17AQ96GS6 310 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 TMEM19Q96HH6 336 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 TMEM41AQ96HV5 264 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 CNTNAP3BQ96NU0 1288 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 DOHHQ9BU89 302 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 PINK1Q9BXM7 581 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 ANGPTL4Q9BY76 406 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 CNTNAP3Q9BZ76 1288 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 TRIM4Q9C037 500 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 LRMDAQ9H2I8 198 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 GORASP2Q9H8Y8 452 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 EXOSC3Q9NQT5 275 aaKnown RBP7.29□□□□□ -1.24
SSBP3-211ENST00000528787 AGPAT4Q9NRZ5 378 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 TAS2R1Q9NYW7 299 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 SELENONQ9NZV5 590 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 SLAMF8Q9P0V8 285 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 WIF1Q9Y5W5 379 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 IGF2RP11717 2491 aa7.29□□□□□ -1.24
SSBP3-211ENST00000528787 DSPPQ9NZW4 1301 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 CHD8Q9HCK8 2581 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 FREM2Q5SZK8 3169 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 CFAP73A6NFT4 308 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 SERINC4A6NH21 518 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 TMEM200CA6NKL6 621 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 EIF4E1BA6NMX2 242 aaKnown RBP7.28□□□□□ -1.24
SSBP3-211ENST00000528787 SYT5O00445 386 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF264O43296 627 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 RRP9O43818 475 aaKnown RBP7.28□□□□□ -1.24
SSBP3-211ENST00000528787 CBR3O75828 277 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 OR6B1O95007 311 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 RASAL1O95294 804 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 NADKO95544 446 aaPredicted RBP7.28□□□□□ -1.24
SSBP3-211ENST00000528787 CSTAP01040 98 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 PABPC4LP0CB38 370 aaKnown RBP7.28□□□□□ -1.24
SSBP3-211ENST00000528787 UMPSP11172 480 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 UBL4AP11441 157 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 CYP4B1P13584 511 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 NID1P14543 1247 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 PGCP20142 388 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 PTGER1P34995 402 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 CASP3P42574 277 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF41P51814 821 aaPredicted RBP7.28□□□□□ -1.24
SSBP3-211ENST00000528787 MVDP53602 400 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 FBXW4P57775 412 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 RPS26P62854 115 aaKnown RBP7.28□□□□□ -1.24
SSBP3-211ENST00000528787 KCNJ10P78508 379 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 SLC25A3Q00325 362 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 PLGLB1Q02325 96 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 TRIM25Q14258 630 aaKnown RBP7.28□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.28□□□□□ -1.24
SSBP3-211ENST00000528787 GLYR1Q49A26 553 aaPredicted RBP7.28□□□□□ -1.24
SSBP3-211ENST00000528787 GTDC1Q4AE62 458 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 KLHL26Q53HC5 615 aa7.28□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF311Q5JNZ3 666 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms