RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 B3GALT5-AS1P59052 145 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 C17orf67Q0P5P2 114 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 GRAMD1BQ3KR37 738 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 BEND6Q5SZJ8 279 aaPredicted RBP29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 HHATQ5VTY9 493 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 MARCH3Q86UD3 253 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 SFXN5Q8TD22 340 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 MOAP1Q96BY2 351 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 C16orf58Q96GQ5 468 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 TUBA1CQ9BQE3 449 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 H0Y3Z8 333 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 LINC01387J3KSC0 135 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 ZNF708P17019 499 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 BST1Q10588 318 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 STX5Q13190 355 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 FBXL19-AS1Q494R0 122 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 COX18Q8N8Q8 333 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 DUSP19Q8WTR2 217 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 ZFP3Q96NJ6 502 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 DUSP26Q9BV47 211 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 BTBD2Q9BX70 525 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 PIGUQ9H490 435 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 KCNN3Q9UGI6 736 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 SNX8Q9Y5X2 465 aa29.94■■■□□ 2.38
SSSCA1-205ENST00000527920 TMEM120BA0PK00 339 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 ANGPTL1O95841 491 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 C6orf47O95873 294 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 KRT16P08779 473 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 TBXA2RP21731 343 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 CCT3P49368 545 aaKnown RBP29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 ZNF136P52737 540 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 WNT3P56703 355 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 CLDN18P56856 261 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 GLYR1Q49A26 553 aaPredicted RBP29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 POMZP3Q6PJE2 187 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 APOOLQ6UXV4 268 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 RELL2Q8NC24 303 aaPredicted RBP29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 GOT1L1Q8NHS2 421 aaPredicted RBP29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 FBXO30Q8TB52 745 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 C1GALT1C1Q96EU7 318 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 LURAP1Q96LR2 239 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 G6PC3Q9BUM1 346 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 CXorf36Q9H7Y0 433 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 MED11Q9P086 117 aa29.93■■■□□ 2.38
SSSCA1-205ENST00000527920 IL18BPO95998 194 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 PEX19P40855 299 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 WDR4P57081 412 aaKnown RBP29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 LASP1Q14847 261 aaKnown RBP29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 CDC73Q6P1J9 531 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 ANKRD42Q8N9B4 389 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 OR4C3Q8NH37 302 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 JADE3Q92613 823 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 PAIP2Q9BPZ3 127 aaKnown RBP29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 ACTRT3Q9BYD9 372 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 MEAF6Q9HAF1 191 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 MCCC2Q9HCC0 563 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 RPH3AQ9Y2J0 694 aaPredicted RBP29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 CSMD1Q96PZ7 3565 aa29.92■■■□□ 2.38
SSSCA1-205ENST00000527920 OXSR1O95747 527 aaPredicted RBP29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 HK1P19367 917 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 BMP5P22003 454 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 CTSSP25774 331 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 STARP49675 285 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 ASCL1P50553 236 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 WNT2BQ93097 391 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 ZBTB9Q96C00 473 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 LRRC46Q96FV0 321 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 PPP1R36Q96LQ0 422 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 TM9SF2Q99805 663 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 UBQLN4Q9NRR5 601 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 GPATCH2Q9NW75 528 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 CLCF1Q9UBD9 225 aa29.91■■■□□ 2.38
SSSCA1-205ENST00000527920 SYT5O00445 386 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 PEPDP12955 493 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 OPRM1P35372 400 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 POU6F2P78424 691 aaPredicted RBP29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 SRYQ05066 204 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 RAET1LQ5VY80 246 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 BHLHB9Q6PI77 547 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 FIGNL1Q6PIW4 674 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 C9orf106Q8NAJ2 232 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 OR8J2Q8NGG1 315 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 NUDT8Q8WV74 236 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 TLCD1Q96CP7 247 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 YIPF4Q9BSR8 244 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 NUF2Q9BZD4 464 aa29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 FOXD3Q9UJU5 478 aaPredicted RBP29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 FAF1Q9UNN5 650 aaPredicted RBP29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 ANKHD1Q8IWZ3 2542 aaKnown RBP29.9■■■□□ 2.38
SSSCA1-205ENST00000527920 CLCA1A8K7I4 914 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 HCRTR2O43614 444 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 DLX5P56178 289 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 HBA1P69905 142 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 TLE4Q04727 773 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 SPDYE7PQ495Y7 208 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 OGFOD2Q6N063 350 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 MISPQ8IVT2 679 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 RAB3IL1Q8TBN0 382 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 SH3GL2Q99962 352 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 PIGQQ9BRB3 760 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms