RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 ANGPTL1O95841 491 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 IGKV1D-16P01601 117 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 HMGN2P05204 90 aaKnown RBP18.7■□□□□ 0.58
VPS28-206ENST00000526734 ZNF708P17019 499 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 LBPP18428 481 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 TBXA2RP21731 343 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 POU6F2P78424 691 aaPredicted RBP18.7■□□□□ 0.58
VPS28-206ENST00000526734 CACNA1DQ01668 2161 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 DPY19L1Q2PZI1 675 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 GRAMD1BQ3KR37 738 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 ATG16L1Q676U5 607 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 CDC73Q6P1J9 531 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 DMRTC2Q8IXT2 367 aaPredicted RBP18.7■□□□□ 0.58
VPS28-206ENST00000526734 JADE3Q92613 823 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 TM9SF2Q99805 663 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 ACTRT3Q9BYD9 372 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 ACBD3Q9H3P7 528 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 MEAF6Q9HAF1 191 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 UBQLN4Q9NRR5 601 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 THAP1Q9NVV9 213 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 FOXD3Q9UJU5 478 aaPredicted RBP18.7■□□□□ 0.58
VPS28-206ENST00000526734 CRYBG3Q68DQ2 2970 aa18.7■□□□□ 0.58
VPS28-206ENST00000526734 A0A1W2PQD3 144 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 SLCO1B7G3V0H7 640 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 RNASET2O00584 256 aaKnown RBP18.69■□□□□ 0.58
VPS28-206ENST00000526734 C6orf47O95873 294 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 IL18BPO95998 194 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 PEPDP12955 493 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 HPGDP15428 266 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 HK1P19367 917 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 EFNA1P20827 205 aaPredicted RBP18.69■□□□□ 0.58
VPS28-206ENST00000526734 LHX2P50458 406 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 ASCL1P50553 236 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 CLNS1AP54105 237 aaKnown RBP18.69■□□□□ 0.58
VPS28-206ENST00000526734 EEFSECP57772 596 aaKnown RBP18.69■□□□□ 0.58
VPS28-206ENST00000526734 EEF1A1P68104 462 aaKnown RBP18.69■□□□□ 0.58
VPS28-206ENST00000526734 STX5Q13190 355 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 LASP1Q14847 261 aaKnown RBP18.69■□□□□ 0.58
VPS28-206ENST00000526734 EEF1A1P5Q5VTE0 462 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 OGFOD2Q6N063 350 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 ADGRE4PQ86SQ3 457 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 MARCH3Q86UD3 253 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 LIX1LQ8IVB5 337 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 ZNF295-AS1Q8N0V1 137 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 TNIP2Q8NFZ5 429 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 OR8J2Q8NGG1 315 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 FBXO30Q8TB52 745 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 DUSP19Q8WTR2 217 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 WNT2BQ93097 391 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 TESCQ96BS2 214 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 TLCD1Q96CP7 247 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 C1GALT1C1Q96EU7 318 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 TUBA1CQ9BQE3 449 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 PIGQQ9BRB3 760 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 DPY30Q9C005 99 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 CXorf36Q9H7Y0 433 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 TMBIM4Q9HC24 238 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 FLRT3Q9NZU0 649 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 KCNN3Q9UGI6 736 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 PKDREJQ9NTG1 2253 aa18.69■□□□□ 0.58
VPS28-206ENST00000526734 CFLARO15519 480 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 NDUFB5O43674 189 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 OXSR1O95747 527 aaPredicted RBP18.68■□□□□ 0.58
VPS28-206ENST00000526734 ATP6V1C1P21283 382 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 CTSSP25774 331 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 OPRM1P35372 400 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 WDR4P57081 412 aaKnown RBP18.68■□□□□ 0.58
VPS28-206ENST00000526734 B3GALT5-AS1P59052 145 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 MAGOHP61326 146 aaKnown RBP18.68■□□□□ 0.58
VPS28-206ENST00000526734 TP53BP2Q13625 1128 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 FBXL19-AS1Q494R0 122 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 ANXA8L1Q5VT79 327 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 RAET1LQ5VY80 246 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 VPS37AQ8NEZ2 397 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 ADAMTS15Q8TE58 950 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 CHMP6Q96FZ7 201 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 C16orf58Q96GQ5 468 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 PPP1R36Q96LQ0 422 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 NUF2Q9BZD4 464 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 HOXD1Q9GZZ0 328 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 MED11Q9P086 117 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 STOML1Q9UBI4 398 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 PCDHGB4Q9UN71 923 aa18.68■□□□□ 0.58
VPS28-206ENST00000526734 A0A087WZY1 265 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 TRPC5OSA6NMA1 111 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 SCDO00767 359 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 SNNO75324 88 aaPredicted RBP18.67■□□□□ 0.58
VPS28-206ENST00000526734 POU3F2P20265 443 aaPredicted RBP18.67■□□□□ 0.58
VPS28-206ENST00000526734 CAPN3P20807 821 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 CLDN18P56856 261 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 PGS1Q32NB8 556 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 FIGNL1Q6PIW4 674 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 CHMP1BQ7LBR1 199 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 MEIOBQ8N635 442 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 ZNF527Q8NB42 609 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 NAXEQ8NCW5 288 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 OR4C3Q8NH37 302 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 RTN4RQ9BZR6 473 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 GPATCH2Q9NW75 528 aa18.67■□□□□ 0.58
VPS28-206ENST00000526734 RPH3AQ9Y2J0 694 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms