RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PTRH1Q86Y79 214 aaKnown RBP12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 NLGN4XQ8N0W4 816 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 WDR20Q8TBZ3 569 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 HOXD1Q9GZZ0 328 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 LDAHQ9H6V9 325 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 DIABLOQ9NR28 239 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 SERGEFQ9UGK8 458 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 HS3ST3A1Q9Y663 406 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 CEPT1Q9Y6K0 416 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 TRPM6Q9BX84 2022 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 CD8B2A6NJW9 211 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 PLOD2O00469 737 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 LDOC1O95751 146 aaPredicted RBP12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 CD8BP10966 210 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZNF26P17031 533 aaPredicted RBP12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 GADD45AP24522 165 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 AP3S2P59780 193 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 TSPAN5P62079 268 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 GALNTL5Q7Z4T8 443 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 IGFN1Q86VF2 1251 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 CHDHQ8NE62 594 aaPredicted RBP12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 TNFAIP8L1Q8WVP5 186 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 ACOT11Q8WXI4 607 aaPredicted RBP12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 THAP4Q8WY91 577 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 VDAC3Q9Y277 283 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 SH3D21A4FU49 640 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 C2CD4DB7Z1M9 353 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 FMO6PO60774 539 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 PEPDP12955 493 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 CD27P26842 260 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 RACK1P63244 317 aaKnown RBP12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 RASGEF1BQ0VAM2 473 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 KEAP1Q14145 624 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 ELOAQ14241 798 aaKnown RBP12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 CEACAM19Q7Z692 300 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZNF101Q8IZC7 436 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 CENPSQ8N2Z9 138 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZBTB8BQ8NAP8 495 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 OR51Q1Q8NH59 317 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 TCTN2Q96GX1 697 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 PLA2G2FQ9BZM2 168 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 MED28Q9H204 178 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 MCCC2Q9HCC0 563 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 PADI2Q9Y2J8 665 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 TET1Q8NFU7 2136 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 LRIT2A6NDA9 550 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 VSTM2BA6NLU5 285 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 FAM227AF5H4B4 570 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 FLRT2O43155 660 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 WBP4O75554 376 aaKnown RBP12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 NDUFB2O95178 105 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 ETHE1O95571 254 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 NR2C1P13056 603 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 EPHA5P54756 1037 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 NFATC3Q12968 1075 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 DNASE1L3Q13609 305 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 ENTPD8Q5MY95 495 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 LEG1Q6P5S2 330 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 P4HA3Q7Z4N8 544 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 SLC22A16Q86VW1 577 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 NAXEQ8NCW5 288 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 MRGPRX3Q96LB0 322 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 MMP27Q9H306 513 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 ASIC5Q9NY37 505 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZNF221Q9UK13 617 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 WDR37Q9Y2I8 494 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 AP1M2Q9Y6Q5 423 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 PRAMEF33A0A0G2JMD5 474 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 TRBV4-1A0A0J9YWV2 114 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 KRBA1A5PL33 1030 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 H3BML4 177 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 FXYD1O00168 92 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 SEC14L5O43304 696 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 ACPPP15309 386 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 FUT1P19526 365 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 KCNJ10P78508 379 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 Q6ZS52 159 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 DTX3Q8N9I9 347 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 NAT6Q93015 286 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 CDH10Q9Y6N8 788 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 AHCTF1Q8WYP5 2266 aa12.26□□□□□ -0.45
PCDHGB1-201ENST00000523390 FAM183AA6NL82 134 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 C12orf71A8MTZ7 269 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 ORC5O43913 435 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 PRAMEF10O60809 474 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 CSN2P05814 226 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 HBQ1P09105 142 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 C21orf33P30042 268 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 MRPL2Q5T653 305 aaKnown RBP12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 OR5M10Q6IEU7 315 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 TUBA3EQ6PEY2 450 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 SPARTQ8N0X7 666 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 OR5T3Q8NGG3 340 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 NEURL3Q96EH8 262 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 DMRTB1Q96MA1 342 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 OR4K3Q96R72 315 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 DUSP23Q9BVJ7 150 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 SGPP1Q9BX95 441 aa12.25□□□□□ -0.45
PCDHGB1-201ENST00000523390 FGF21Q9NSA1 209 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms