RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 RIMKLAQ8IXN7 391 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 OR5M1Q8NGP8 315 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 FBXO30Q8TB52 745 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 FAM222BQ8WU58 562 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 SLC9A6Q92581 669 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 INTS12Q96CB8 462 aaKnown RBP11.18□□□□□ -0.62
VEGFA-223ENST00000523125 C1GALT1C1Q96EU7 318 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 DTNBP1Q96EV8 351 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 C16orf58Q96GQ5 468 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 ZFP3Q96NJ6 502 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 MS4A4EQ96PG1 132 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 C1orf50Q9BV19 199 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 ZNF395Q9H8N7 513 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-223ENST00000523125 C3orf14Q9HBI5 128 aa11.18□□□□□ -0.62
VEGFA-223ENST00000523125 DNAJB12Q9NXW2 375 aaKnown RBP11.18□□□□□ -0.62
VEGFA-223ENST00000523125 FOXD3Q9UJU5 478 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-223ENST00000523125 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 OR2M5A3KFT3 312 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 TMEM114B3SHH9 223 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 EEF1E1-BLOC1S5C9J1V9 151 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 EEF1E1O43324 174 aaKnown RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 ITM2AO43736 263 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 SKAP2O75563 359 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 LYPLA1O75608 230 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 TNFSF13O75888 250 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 OXSR1O95747 527 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 NGFRP08138 427 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 PEPDP12955 493 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 TBXA2RP21731 343 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 DNAJA1P31689 397 aaKnown RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 SERPINB4P48594 390 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 PSMD4P55036 377 aaKnown RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 DIO3P55073 304 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 C17orf67Q0P5P2 114 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 DAZAP2Q15038 168 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 KRT71Q3SY84 523 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 GLYR1Q49A26 553 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 VPS26BQ4G0F5 336 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 ATP6AP1LQ52LC2 224 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 IL23RQ5VWK5 629 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 RAET1LQ5VY80 246 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 ZCCHC12Q6PEW1 402 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 SPNS3Q6ZMD2 512 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 R3HCC1LQ7Z5L2 792 aaKnown RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 NUDCD3Q8IVD9 361 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 GCNT2Q8N0V5 402 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 KRTCAP2Q8N6L1 136 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 PSMA8Q8TAA3 256 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 COQ8BQ96D53 544 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 FAM120BQ96EK7 910 aaKnown RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 LRRC46Q96FV0 321 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 OTUB1Q96FW1 271 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 PKNOX2Q96KN3 472 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 GPATCH1Q9BRR8 931 aaKnown RBP11.17□□□□□ -0.62
VEGFA-223ENST00000523125 YIPF4Q9BSR8 244 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 SFXN3Q9BWM7 321 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 TBL1XR1Q9BZK7 514 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 C20orf27Q9GZN8 174 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 LIME1Q9H400 295 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 PTGES2Q9H7Z7 377 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 RASSF1Q9NS23 344 aa11.17□□□□□ -0.62
VEGFA-223ENST00000523125 A0A1W2PRB8 838 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 A6NNC1 897 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 ALG1L2C9J202 215 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 HMGN2P05204 90 aaKnown RBP11.16□□□□□ -0.62
VEGFA-223ENST00000523125 DHRS4L1P0CG22 281 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 MAPK1P28482 360 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 HPCAL1P37235 193 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 CLK3P49761 638 aaKnown RBP11.16□□□□□ -0.62
VEGFA-223ENST00000523125 CLDN20P56880 219 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 SORDQ00796 357 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 MPP2Q14168 576 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 TNFAIP8L3Q5GJ75 292 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 CCNJQ5T5M9 372 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 FIGNL1Q6PIW4 674 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 SZRD1Q7Z422 152 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 KIF18BQ86Y91 864 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 GRAMD2AQ8IUY3 354 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 UBQLNLQ8IYU4 475 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 FNDC5Q8NAU1 212 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 GOT1L1Q8NHS2 421 aaPredicted RBP11.16□□□□□ -0.62
VEGFA-223ENST00000523125 LINC01560Q8TB33 94 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 NPAS1Q99742 590 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 KLHDC3Q9BQ90 382 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 POLDIP3Q9BY77 421 aaKnown RBP11.16□□□□□ -0.62
VEGFA-223ENST00000523125 CXorf36Q9H7Y0 433 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 ZCCHC3Q9NUD5 404 aaKnown RBP11.16□□□□□ -0.62
VEGFA-223ENST00000523125 RAB21Q9UL25 225 aa11.16□□□□□ -0.62
VEGFA-223ENST00000523125 A0A1W2PNV4 684 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 WDR91A4D1P6 747 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 TUBAL3A6NHL2 446 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 A8MXE2 369 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 SHISA8B8ZZ34 492 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 H3BML4 177 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 LINC01387J3KSC0 135 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 BIRC5O15392 142 aa11.15□□□□□ -0.62
VEGFA-223ENST00000523125 RGS16O15492 202 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-223ENST00000523125 CTIFO43310 598 aaKnown RBP11.15□□□□□ -0.62
VEGFA-223ENST00000523125 GMFGO60234 142 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms