RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CLRN2A0PK11 232 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 ZNF840PA6NDX5 716 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 SHISA9B4DS77 424 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 E9PQ18 207 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 SLC17A2O00624 439 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 PPIHO43447 177 aaKnown RBP3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 LATO43561 262 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 NUDT14O95848 222 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 OPN1MWP04001 364 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 GSTT2P0CG29 244 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 GSTT2BP0CG30 244 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 CT45A10P0DMU9 189 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 OPN1MW2P0DN77 364 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 OPN1MW3P0DN78 364 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 PVRP15151 417 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 RPA2P15927 270 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 PGCP20142 388 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 BCL3P20749 454 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 UQCRC2P22695 453 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 BRCC3P46736 316 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 ALDH3B2P48448 385 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 LMO4P61968 165 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 TGIF1Q15583 401 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 TATDN3Q17R31 274 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 CEP55Q53EZ4 464 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 NHLRC3Q5JS37 347 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 LEMD1Q68G75 181 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 FAM71F2Q6NXP2 309 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 PAQR6Q6TCH4 344 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 METTL7BQ6UX53 244 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 TMUB2Q71RG4 321 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 DPY19L4Q7Z388 723 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 TIPARPQ7Z3E1 657 aaKnown RBP3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 ZNF679Q8IYX0 411 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 LINC01561Q8N1V8 128 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 ARL14Q8N4G2 192 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 ANKFN1Q8N957 763 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 OR4Q3Q8NH05 313 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 OR52J3Q8NH60 311 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 M1APQ8TC57 530 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 ITLN1Q8WWA0 313 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 SENP8Q96LD8 212 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 PSKH2Q96QS6 385 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 RANBP9Q96S59 729 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 OMDQ99983 421 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 PYGO2Q9BRQ0 406 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 EDEM2Q9BV94 578 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 TM2D1Q9BX74 207 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 UBXN6Q9BZV1 441 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 MRPL39Q9NYK5 338 aaKnown RBP3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 EHFQ9NZC4 300 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 MRPS33Q9Y291 106 aaKnown RBP3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 NTNG1Q9Y2I2 539 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 GMPPBQ9Y5P6 360 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 GRIN2DO15399 1336 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 GSAPA4D1B5 854 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 ZSCAN5CA6NGD5 496 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 K7ERI5 159 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 FOLR2P14207 255 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 H2AFXP16104 143 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 HNF1AP20823 631 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 PSMA2P25787 234 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 PPP2R1BP30154 601 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 EMDP50402 254 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 SLC7A2P52569 658 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 DSCR10P59022 87 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 KRTAP10-3P60369 221 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 ERVPABLB-1P60509 514 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 RND3P61587 244 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 RPL8P62917 257 aaKnown RBP3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 CBX1P83916 185 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 EWSR1Q01844 656 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 PJVKQ0ZLH3 352 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 CCDC57Q2TAC2 916 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 DCST2Q5T1A1 773 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 LGSNQ5TDP6 509 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 RGS9BPQ6ZS82 235 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 LANCL3Q6ZV70 420 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 ARNTL2Q8WYA1 636 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 RPL3LQ92901 407 aaKnown RBP3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 C18orf25Q96B23 403 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 COQ2Q96H96 371 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 POLR3FQ9H1D9 316 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 HEXA-AS1Q9H8Q6 139 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 SP140LQ9H930 580 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 PANK3Q9H999 370 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 SMOXQ9NWM0 555 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 CLEC5AQ9NY25 188 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 ZNF581Q9P0T4 197 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 PIPOXQ9P0Z9 390 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 BARX2Q9UMQ3 279 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 RASD1Q9Y272 281 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 OR10H1Q9Y4A9 318 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 SPACA6W5XKT8 324 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 NESP48681 1621 aa3.62□□□□□ -1.83
HMGB1P1-201ENST00000522557 SYNJ2BP-COX16A0A087WUM0 186 aa3.61□□□□□ -1.83
HMGB1P1-201ENST00000522557 ACOD1A6NK06 481 aa3.61□□□□□ -1.83
HMGB1P1-201ENST00000522557 A8MUI8 341 aa3.61□□□□□ -1.83
HMGB1P1-201ENST00000522557 ZNF487B1APH4 448 aa3.61□□□□□ -1.83
HMGB1P1-201ENST00000522557 STX7O15400 261 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms