RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 LINC00032P0C843 101 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 SDC1P18827 310 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 CD53P19397 219 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 HOXC12P31275 282 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 FRKP42685 505 aaPredicted RBP11.2□□□□□ -0.62
CSMD1-205ENST00000519623 RFX3P48380 749 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 CLK3P49761 638 aaKnown RBP11.2□□□□□ -0.62
CSMD1-205ENST00000519623 PSMD4P55036 377 aaKnown RBP11.2□□□□□ -0.62
CSMD1-205ENST00000519623 PPP2R2AP63151 447 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 OCRLQ01968 901 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 HSPB3Q12988 150 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 PDE7AQ13946 482 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 PCLAFQ15004 111 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 POU4F3Q15319 338 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 GUSBP1Q15486 140 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 UGT3A2Q3SY77 523 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 C4orf33Q8N1A6 199 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 CNEP1R1Q8N9A8 125 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 OR4C3Q8NH37 302 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 CEP70Q8NHQ1 597 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 FNDC9Q8TBE3 224 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 GPR151Q8TDV0 419 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 POM121Q96HA1 1249 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 ZNF845Q96IR2 970 aaPredicted RBP11.2□□□□□ -0.62
CSMD1-205ENST00000519623 CCT7Q99832 543 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 PIGQQ9BRB3 760 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 PINK1Q9BXM7 581 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 OPN3Q9H1Y3 402 aaPredicted RBP11.2□□□□□ -0.62
CSMD1-205ENST00000519623 REEP4Q9H6H4 257 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 RNF122Q9H9V4 155 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 C3orf14Q9HBI5 128 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 EQTNQ9NQ60 294 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 ZNF175Q9Y473 711 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 TESMINQ9Y4I5 508 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 DNAJC15Q9Y5T4 150 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 AP4B1Q9Y6B7 739 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 ARID1AO14497 2285 aa11.2□□□□□ -0.62
CSMD1-205ENST00000519623 SHISA8B8ZZ34 492 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 H3BML4 177 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 LSM1O15116 133 aaKnown RBP11.19□□□□□ -0.62
CSMD1-205ENST00000519623 SIAH2O43255 324 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 SEC14L5O43304 696 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 CTIFO43310 598 aaKnown RBP11.19□□□□□ -0.62
CSMD1-205ENST00000519623 TRIM13O60858 407 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 SMNDC1O75940 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
CSMD1-205ENST00000519623 KCNH1O95259 989 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 FGF4P08620 206 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 ACP2P11117 423 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 FOSL1P15407 271 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 TBXA2RP21731 343 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 GPC1P35052 558 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 CD79BP40259 229 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 PRKAG1P54619 331 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 MANFP55145 182 aaKnown RBP11.19□□□□□ -0.62
CSMD1-205ENST00000519623 EXOSC6Q5RKV6 272 aaKnown RBP11.19□□□□□ -0.62
CSMD1-205ENST00000519623 KANK2Q63ZY3 851 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 ZAR1Q86SH2 424 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 GGNQ86UU5 652 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 METTL25Q8N6Q8 603 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 CDRT4Q8N9R6 151 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 SLC16A11Q8NCK7 471 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 WFDC11Q8NEX6 87 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 NUP43Q8NFH3 380 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 PPCDCQ96CD2 204 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 TSSK3Q96PN8 268 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 TRMOQ9BU70 441 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 TBL1XR1Q9BZK7 514 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 GSX1Q9H4S2 264 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-205ENST00000519623 ACSS1Q9NUB1 689 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-205ENST00000519623 FBXO34Q9NWN3 711 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 ELOVL5Q9NYP7 299 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 SH3BP4Q9P0V3 963 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 ROS1P08922 2347 aa11.19□□□□□ -0.62
CSMD1-205ENST00000519623 DEFB108AA8MXU0 73 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 ALG1L2C9J202 215 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 GMFGO60234 142 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 AQP8O94778 261 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 KCNK2O95069 426 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 OXSR1O95747 527 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-205ENST00000519623 CHRNGP07510 517 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 NGFRP08138 427 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 CD8BP10966 210 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 NEFHP12036 1026 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 BCKDHAP12694 445 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 HOXB4P17483 251 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-205ENST00000519623 UGT2B10P36537 528 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 CPOXP36551 454 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 PON3Q15166 354 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.18□□□□□ -0.62
CSMD1-205ENST00000519623 VPS26BQ4G0F5 336 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 C22orf34Q6ZV56 151 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 GALNT10Q86SR1 603 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 CXorf67Q86X51 503 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-205ENST00000519623 KRTAP1-3Q8IUG1 177 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 BANPQ8N9N5 519 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 ZNF610Q8N9Z0 462 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 CLHC1Q8NHS4 586 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 SLC9A6Q92581 669 aa11.18□□□□□ -0.62
CSMD1-205ENST00000519623 ZBED6CLQ96FA7 236 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms