RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 A0A1W2PNV4 684 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 OR2M5A3KFT3 312 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 ALG1L2C9J202 215 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 PEX11AO75192 247 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 SKAP2O75563 359 aaPredicted RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 TNFSF13O75888 250 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 KCNK2O95069 426 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 OXSR1O95747 527 aaPredicted RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 TGM6O95932 706 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 EFNA1P20827 205 aaPredicted RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 LCN1P31025 176 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 DNAJA1P31689 397 aaKnown RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 PRKAG1P54619 331 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 CLDN15P56746 228 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 ZNF844Q08AG5 666 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 C17orf67Q0P5P2 114 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 DAZAP2Q15038 168 aaPredicted RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 DUSP5Q16690 384 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 TMEM44Q2T9K0 475 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 C6orf136Q5SQH8 315 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 GALNT10Q86SR1 603 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 EXOC3L1Q86VI1 746 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 KIF18BQ86Y91 864 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 MEIOBQ8N635 442 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 OR7A2PQ8NGA2 310 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 GOT1L1Q8NHS2 421 aaPredicted RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 PSMA8Q8TAA3 256 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 DUSP19Q8WTR2 217 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 SLC9A6Q92581 669 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 NRGNQ92686 78 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 NINJ1Q92982 152 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 C16orf58Q96GQ5 468 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 PKNOX2Q96KN3 472 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 PIGQQ9BRB3 760 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 C1orf50Q9BV19 199 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 RBM24Q9BX46 236 aaKnown RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 POLDIP3Q9BY77 421 aaKnown RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 CLEC4MQ9H2X3 399 aaPredicted RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 PIGMQ9H3S5 423 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 GALNT8Q9NY28 637 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 PACSIN3Q9UKS6 424 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 ZNF337Q9Y3M9 751 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 ANKHD1Q8IWZ3 2542 aaKnown RBP9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 A0A1W2PRB8 838 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 TUBAL3A6NHL2 446 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 SLC22A20A6NK97 555 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 H0YC42 278 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 H3BML4 177 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 ZNF500O60304 480 aaPredicted RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 TNFRSF21O75509 655 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 LYPLA1O75608 230 aaPredicted RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 GOSR1O95249 250 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 HMGN2P05204 90 aaKnown RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 CRHP06850 196 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 ALOX5P09917 674 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 LAMP1P11279 417 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 ZNF17P17021 662 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 TBXA2RP21731 343 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 SERPINB4P48594 390 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 PRIM2P49643 509 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 SUCLG1P53597 346 aaKnown RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 DIO3P55073 304 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 TPD52P55327 224 aaPredicted RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 CLDN20P56880 219 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 EEFSECP57772 596 aaKnown RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 C21orf58P58505 322 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 EEF1A1P68104 462 aaKnown RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 OCRLQ01968 901 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 KRT71Q3SY84 523 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 EEF1A1P5Q5VTE0 462 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 IL23RQ5VWK5 629 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 OR2A2Q6IF42 318 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 FIGNL1Q6PIW4 674 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 ZAR1Q86SH2 424 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 LUZP2Q86TE4 346 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 GGNQ86UU5 652 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 RIMKLAQ8IXN7 391 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 UBQLNLQ8IYU4 475 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 METTL25Q8N6Q8 603 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 COX18Q8N8Q8 333 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 FNDC5Q8NAU1 212 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 OR5M1Q8NGP8 315 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 OR4C3Q8NH37 302 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 OTUB1Q96FW1 271 aaPredicted RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 ZIM3Q96PE6 472 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 STACQ99469 402 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 CXorf36Q9H7Y0 433 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 HHATLQ9HCP6 504 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 SSU72Q9NP77 194 aaKnown RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 DUSP22Q9NRW4 184 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 ZCCHC3Q9NUD5 404 aaKnown RBP9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 ATAD3AQ9NVI7 634 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 GIN1Q9NXP7 522 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 ASIC5Q9NY37 505 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 ZNF175Q9Y473 711 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 AP4B1Q9Y6B7 739 aa9.43□□□□□ -0.9
HMGXB3-205ENST00000514469 VPS13CQ709C8 3753 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 A0A087WZY1 265 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 A0A1W2PQD3 144 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 C7orf72A4D263 438 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms