RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 IFT52Q9Y366 437 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 WDR45Q9Y484 360 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 KCNE3Q9Y6H6 103 aa9.35□□□□□ -0.91
NEDD9-214ENST00000513989 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.35□□□□□ -0.91
NEDD9-214ENST00000513989 PRORSD1PA6NEY8 169 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 SCDO00767 359 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 TSPAN2O60636 221 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 H6PDO95479 791 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 WDPCPO95876 746 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 P04436 131 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 BCHEP06276 602 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 ARAFP10398 606 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 HSD17B1P14061 328 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 ETS2P15036 469 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 CD46P15529 392 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 TBXA2RP21731 343 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 HTR1EP28566 365 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 PCGF2P35227 344 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 SOX11P35716 441 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 CD96P40200 585 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 SOX3P41225 446 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 GSK3BP49841 420 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 ATP12AP54707 1039 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 TLE1Q04724 770 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 SRSF1Q07955 248 aaKnown RBP eCLIP9.34□□□□□ -0.91
NEDD9-214ENST00000513989 BNIP2Q12982 314 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 KCNAB2Q13303 367 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 SNTA1Q13424 505 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 LARS2Q15031 903 aaKnown RBP9.34□□□□□ -0.91
NEDD9-214ENST00000513989 GPR68Q15743 365 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 ADRM1Q16186 407 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 SYPL1Q16563 259 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 NTRK2Q16620 822 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF791Q3KP31 576 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-214ENST00000513989 TBCELQ5QJ74 424 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 AP1ARQ63HQ0 302 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 C16orf47Q6ZP98 133 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-214ENST00000513989 RTL4Q6ZR62 310 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 CALHM3Q86XJ0 350 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 PTRH1Q86Y79 214 aaKnown RBP9.34□□□□□ -0.91
NEDD9-214ENST00000513989 MICU2Q8IYU8 434 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 CYP4Z2PQ8N1L4 340 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 BEST3Q8N1M1 668 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 ANKFN1Q8N957 763 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 GOLM1Q8NBJ4 401 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 OR5M3Q8NGP4 307 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 FBXO27Q8NI29 283 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 NFKBIDQ8NI38 313 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 RASSF5Q8WWW0 418 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 MAL2Q969L2 176 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 EFHD2Q96C19 240 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-214ENST00000513989 SLC7A6OSQ96CW6 309 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-214ENST00000513989 C5orf34Q96MH7 638 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 RAB3IPQ96QF0 476 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-214ENST00000513989 TREX2Q9BQ50 279 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-214ENST00000513989 TBL1XR1Q9BZK7 514 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 LRMDAQ9H2I8 198 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 MUC13Q9H3R2 512 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 SERHL2Q9H4I8 314 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 TUBD1Q9UJT1 453 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 SLC13A4Q9UKG4 626 aa9.34□□□□□ -0.91
NEDD9-214ENST00000513989 NOTCH2Q04721 2471 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 OR5H15A6NDH6 313 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 GTPBP1O00178 669 aaKnown RBP9.33□□□□□ -0.92
NEDD9-214ENST00000513989 NME4O00746 187 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 CIB2O75838 187 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 OR6B1O95007 311 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 SNX4O95219 450 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 PGM3O95394 542 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 UTS2O95399 124 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 NADKO95544 446 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-214ENST00000513989 DBIP07108 87 aaKnown RBP9.33□□□□□ -0.92
NEDD9-214ENST00000513989 NGFRP08138 427 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 NUDT7P0C024 238 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 IL7RP16871 459 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 GZMMP51124 257 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 FBXW4P57775 412 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 CHRNEQ04844 493 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 TUBA3CQ13748 450 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 ELOAQ14241 798 aaKnown RBP9.33□□□□□ -0.92
NEDD9-214ENST00000513989 COLEC12Q5KU26 742 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 CCNJQ5T5M9 372 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 TUBA3EQ6PEY2 450 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 IGFL2Q6UWQ7 119 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 ZZZ3Q8IYH5 903 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 PRR22Q8IZ63 422 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 ZNF619Q8N2I2 560 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 AMER2Q8N7J2 671 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 LZICQ8WZA0 190 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 FIG4Q92562 907 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 DTNBP1Q96EV8 351 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 TMEM19Q96HH6 336 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 TRIM8Q9BZR9 551 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 TRIM15Q9C019 465 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 ZNF350Q9GZX5 532 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 SAP130Q9H0E3 1048 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 METTL7AQ9H8H3 244 aa9.33□□□□□ -0.92
NEDD9-214ENST00000513989 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-214ENST00000513989 SACM1LQ9NTJ5 587 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms