RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CCL7P80098 99 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 RHAGQ02094 409 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 MVKQ03426 396 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 TRA2AQ13595 282 aaKnown RBP eCLIP7.76□□□□□ -1.17
RNF4-220ENST00000513578 ERV3-1Q14264 604 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 ZNF267Q14586 743 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 ELAVL1Q15717 326 aaKnown RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 GPR68Q15743 365 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 MAPK14Q16539 360 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 CNPY1Q3B7I2 92 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 CT45A2Q5DJT8 189 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 TMEM201Q5SNT2 666 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 SLC25A30Q5SVS4 291 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 C12orf73Q69YU5 71 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 ISLR2Q6UXK2 745 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 DBX2Q6ZNG2 339 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 RBM44Q6ZP01 1051 aaKnown RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 KCTD8Q6ZWB6 473 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 WDR53Q7Z5U6 358 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 GPR141Q7Z602 305 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 ZER1Q7Z7L7 766 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 MRGPREQ86SM8 312 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 RANBP3LQ86VV4 465 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 RNF113BQ8IZP6 322 aaKnown RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 CLDN22Q8N7P3 220 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 OR4K5Q8NGD3 323 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 OR14A16Q8NHC5 309 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 ZNF420Q8TAQ5 688 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 PTPMT1Q8WUK0 201 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 APH1BQ8WW43 257 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 ACOT11Q8WXI4 607 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 PIK3R3Q92569 461 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 PTCHD1Q96NR3 888 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 SLC46A1Q96NT5 459 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 NODALQ96S42 347 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 MYCBPQ99417 103 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 DOK1Q99704 481 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 MCHR1Q99705 422 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 ZNF559Q9BR84 538 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 HOXD1Q9GZZ0 328 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 QRSL1Q9H0R6 528 aaKnown RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 SLC25A19Q9HC21 320 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 Q9N2J8 555 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 SEMA4GQ9NTN9 838 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 FKBP14Q9NWM8 211 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 SIDT1Q9NXL6 827 aaKnown RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 ZNF226Q9NYT6 803 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 KCNE5Q9UJ90 142 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 GPR55Q9Y2T6 319 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 COL27A1Q8IZC6 1860 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 USP34Q70CQ2 3546 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 TRIOO75962 3097 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 SDK1Q7Z5N4 2213 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 KMT2EQ8IZD2 1858 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 IGHV5-10-1A0A0J9YXX1 117 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 CPED1A4D0V7 1026 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 TRAPPC13A5PLN9 417 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 FAM86C2PA6NEL3 165 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 TRIM64BA6NI03 449 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 OR6C76A6NM76 312 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 C17orf105B2RV13 164 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 H3BSA7 217 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 NTN3O00634 580 aaPredicted RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 POLR1CO15160 346 aaPredicted RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 TO15178 435 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 KLF4O43474 513 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 OR6B1O95007 311 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 LYPD3O95274 346 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 CFIP05156 583 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 RPLP0P05388 317 aaKnown RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 SP9P0CG40 484 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 MYF5P13349 255 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 TNNI3P19429 210 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 MAOAP21397 527 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 PCMT1P22061 227 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 ALAS2P22557 587 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 MMP11P24347 488 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 EEF1B2P24534 225 aaKnown RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 ACVR2AP27037 513 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 SSTR4P31391 388 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 STAT5AP42229 794 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 OR1D4P47884 311 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 NUBP1P53384 320 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 ATP12AP54707 1039 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 SLC37A1P57057 533 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 TSPAN31Q12999 210 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 FGFBP1Q14512 234 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 SNAP47Q5SQN1 464 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 CCNJQ5T5M9 372 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 MRPL2Q5T653 305 aaKnown RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 GTF2IRD2BQ6EKJ0 949 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 XAF1Q6GPH4 301 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 LAIR1Q6GTX8 287 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 ZNF613Q6PF04 617 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 NPSR1Q6W5P4 371 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 RASSF6Q6ZTQ3 369 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 PLEKHM3Q6ZWE6 761 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 MBOAT2Q6ZWT7 520 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 PRSS48Q7RTY5 328 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms