RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 LHX2P50458 406 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 NME5P56597 212 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 CLDN8P56748 225 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 KRTAP10-9P60411 292 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 RPS26P62854 115 aaKnown RBP12.04□□□□□ -0.48
RNF4-215ENST00000511843 HBA1P69905 142 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 PRR5P85299 388 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 MAD2L1Q13257 205 aaPredicted RBP12.04□□□□□ -0.48
RNF4-215ENST00000511843 MLC1Q15049 377 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 SPDYE7PQ495Y7 208 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 VPS26BQ4G0F5 336 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 EXOSC6Q5RKV6 272 aaKnown RBP12.04□□□□□ -0.48
RNF4-215ENST00000511843 NSUN5P2Q63ZY6 315 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 LACC1Q8IV20 430 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 UBQLNLQ8IYU4 475 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 COX18Q8N8Q8 333 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 C9orf106Q8NAJ2 232 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 ACBD4Q8NC06 268 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 TLCD1Q96CP7 247 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 ATAD3AQ9NVI7 634 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 GIN1Q9NXP7 522 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 ASIC5Q9NY37 505 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 HAO1Q9UJM8 370 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 MRTO4Q9UKD2 239 aaKnown RBP12.04□□□□□ -0.48
RNF4-215ENST00000511843 PCDHGB3Q9Y5G1 929 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 HEATR5AQ86XA9 2040 aa12.04□□□□□ -0.48
RNF4-215ENST00000511843 GOLGA8QA0A0J9YX86 632 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 GOLGA8OA6NCC3 632 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 TTC36A6NLP5 189 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 CLCA1A8K7I4 914 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 GOLGA8NF8WBI6 632 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 H0YC42 278 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 SDHDO14521 159 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 ALDOCP09972 364 aaKnown RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 CPN1P15169 458 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 DDX5P17844 614 aaKnown RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 IGFBP2P18065 325 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 PRIM2P49643 509 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 CLK3P49761 638 aaKnown RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 ZNF136P52737 540 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 PSMD4P55036 377 aaKnown RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 CASP9P55211 416 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 TPD52P55327 224 aaPredicted RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 DLX5P56178 289 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 DSCR4P56555 118 aaPredicted RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 CLDN18P56856 261 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 POU6F2P78424 691 aaPredicted RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 RCAN2Q14206 197 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 CASP8Q14790 479 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 LSM12Q3MHD2 195 aaKnown RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 RAET1LQ5VY80 246 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 POMZP3Q6PJE2 187 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 ENPP6Q6UWR7 440 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 ARSKQ6UWY0 536 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 ANKRD46Q86W74 232 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 OR5D16Q8NGK9 328 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 PSMA8Q8TAA3 256 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 FAM110BQ8TC76 370 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 ARL8AQ96BM9 186 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 SH3YL1Q96HL8 342 aaPredicted RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 PRPF18Q99633 342 aaKnown RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 NPAS1Q99742 590 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 SPOCK3Q9BQ16 436 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 BHLHE41Q9C0J9 482 aaPredicted RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 SERHL2Q9H4I8 314 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 WDR55Q9H6Y2 383 aaPredicted RBP12.03□□□□□ -0.48
RNF4-215ENST00000511843 RUBCNLQ9H714 662 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 MEAF6Q9HAF1 191 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 SDHAF3Q9NRP4 125 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 GPATCH2Q9NW75 528 aa12.03□□□□□ -0.48
RNF4-215ENST00000511843 CD8B2A6NJW9 211 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 HSPB2A8KAH6 182 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 SNNO75324 88 aaPredicted RBP12.02□□□□□ -0.49
RNF4-215ENST00000511843 IL2RAP01589 272 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 C1QCP02747 245 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 ZNF708P17019 499 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 LBPP18428 481 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 EPHA3P29320 983 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 TIMP3P35625 211 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 DGKQP52824 942 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 C21orf58P58505 322 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 PHC1P78364 1004 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 FOXF2Q12947 444 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 CD226Q15762 336 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 HSPB2Q16082 182 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.02□□□□□ -0.49
RNF4-215ENST00000511843 SMU1Q2TAY7 513 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 SLC25A35Q3KQZ1 300 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 CDC73Q6P1J9 531 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 AAGABQ6PD74 315 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 OLIG3Q7RTU3 272 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 CAMKMTQ7Z624 323 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 GCNT2Q8N0V5 402 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 OR4A15Q8NGL6 344 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 ZPLD1Q8TCW7 415 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 SMPDL3BQ92485 455 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 C1GALT1C1Q96EU7 318 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 MARK4Q96L34 752 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 TEX37Q96LM6 180 aa12.02□□□□□ -0.49
RNF4-215ENST00000511843 TREX2Q9BQ50 279 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms