RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 KCTD12Q96CX2 325 aaKnown RBP12.04□□□□□ -0.48
HMGB2-205ENST00000511316 FUZQ9BT04 418 aa12.04□□□□□ -0.48
HMGB2-205ENST00000511316 LRRC61Q9BV99 259 aa12.04□□□□□ -0.48
HMGB2-205ENST00000511316 FNDC11Q9BVV2 318 aa12.04□□□□□ -0.48
HMGB2-205ENST00000511316 C11orf54Q9H0W9 315 aaPredicted RBP12.04□□□□□ -0.48
HMGB2-205ENST00000511316 DPEP2Q9H4A9 486 aa12.04□□□□□ -0.48
HMGB2-205ENST00000511316 PELI2Q9HAT8 420 aa12.04□□□□□ -0.48
HMGB2-205ENST00000511316 ASB6Q9NWX5 421 aa12.04□□□□□ -0.48
HMGB2-205ENST00000511316 TAS2R16Q9NYV7 291 aa12.04□□□□□ -0.48
HMGB2-205ENST00000511316 SEC14L3Q9UDX4 400 aa12.04□□□□□ -0.48
HMGB2-205ENST00000511316 COL5A1P20908 1838 aaPredicted RBP12.03□□□□□ -0.48
HMGB2-205ENST00000511316 TRBV4-1A0A0J9YWV2 114 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 TNFRSF10CO14798 259 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 YKT6O15498 198 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 AKAP8O43823 692 aaKnown RBP12.03□□□□□ -0.48
HMGB2-205ENST00000511316 C1QCP02747 245 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 RPN2P04844 631 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 ADRB1P08588 477 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 NPPBP16860 134 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 PRKCAP17252 672 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 FRKP42685 505 aaPredicted RBP12.03□□□□□ -0.48
HMGB2-205ENST00000511316 CRISP3P54108 245 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 KIAA1024LP59773 190 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 SRP54P61011 504 aaKnown RBP12.03□□□□□ -0.48
HMGB2-205ENST00000511316 DAB2P98082 770 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 MRPL28Q13084 256 aaKnown RBP12.03□□□□□ -0.48
HMGB2-205ENST00000511316 TARDBPQ13148 414 aaKnown RBP eCLIP12.03□□□□□ -0.486e-20■■■■■ 73.3
HMGB2-205ENST00000511316 ARHGAP19Q14CB8 494 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 ENPP7Q6UWV6 458 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 ADAMTSL4Q6UY14 1074 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 ZNF782Q6ZMW2 699 aaPredicted RBP12.03□□□□□ -0.48
HMGB2-205ENST00000511316 EID2Q8N6I1 236 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 Q8N9G6 341 aaPredicted RBP12.03□□□□□ -0.48
HMGB2-205ENST00000511316 OR52I1Q8NGK6 324 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 SLC38A5Q8WUX1 472 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 ZNF480Q8WV37 535 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 CREB3L1Q96BA8 519 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 OTULINQ96BN8 352 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 TMEM19Q96HH6 336 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 HYLS1Q96M11 299 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 NEDD4LQ96PU5 975 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 JAM3Q9BX67 310 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 RHBGQ9H310 441 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 BCL2L10Q9HD36 194 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 TIGARQ9NQ88 270 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 DNAJC27Q9NZQ0 273 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 PLEKHB1Q9UF11 243 aaPredicted RBP12.03□□□□□ -0.48
HMGB2-205ENST00000511316 CARD8Q9Y2G2 431 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 CSNK1G3Q9Y6M4 447 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 ASXL3Q9C0F0 2248 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 CEP295Q9C0D2 2601 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 LRP4O75096 1905 aa12.03□□□□□ -0.48
HMGB2-205ENST00000511316 SIGLEC6O43699 453 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 CD53P19397 219 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 GIPRP48546 466 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 MANFP55145 182 aaKnown RBP12.02□□□□□ -0.48
HMGB2-205ENST00000511316 CLDN20P56880 219 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 HNRNPKP61978 463 aaKnown RBP eCLIP12.02□□□□□ -0.48
HMGB2-205ENST00000511316 CDK5Q00535 292 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 C1orf61Q13536 156 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 DSG2Q14126 1118 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 SPDYE7PQ495Y7 208 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 SYT14P1Q58G82 188 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 LIPKQ5VXJ0 399 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 C1orf94Q6P1W5 598 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 TMIGD1Q6UXZ0 262 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 SLC9B2Q86UD5 537 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 OR4C6Q8NH72 309 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 CCL4L1Q8NHW4 92 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 VANGL1Q8TAA9 524 aaPredicted RBP12.02□□□□□ -0.48
HMGB2-205ENST00000511316 TEX47Q8TBZ9 253 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 OTUB1Q96FW1 271 aaPredicted RBP12.02□□□□□ -0.48
HMGB2-205ENST00000511316 LINC00615Q96LM1 132 aaPredicted RBP12.02□□□□□ -0.48
HMGB2-205ENST00000511316 PRRC1Q96M27 445 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 WDR92Q96MX6 357 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 SOSTQ9BQB4 213 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 MARVELD1Q9BSK0 173 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 KCNN2Q9H2S1 579 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 RABL2AQ9UBK7 228 aaPredicted RBP12.02□□□□□ -0.48
HMGB2-205ENST00000511316 RABL2BQ9UNT1 228 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 SLC17A4Q9Y2C5 497 aa12.02□□□□□ -0.48
HMGB2-205ENST00000511316 SPIN1Q9Y657 262 aaPredicted RBP12.02□□□□□ -0.48
HMGB2-205ENST00000511316 ZZEF1O43149 2961 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 KNTC1P50748 2209 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 FAM240BA0A1B0GVZ2 78 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 SYT5O00445 386 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 FFAR1O14842 300 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 TFECO14948 347 aaPredicted RBP12.02□□□□□ -0.49
HMGB2-205ENST00000511316 BCHEP06276 602 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 IL3P08700 152 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 MYF5P13349 255 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 ALAS2P22557 587 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 BDKRB1P46663 353 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 KHKP50053 298 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 MAPK12P53778 367 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 LIM2P55344 173 aa12.02□□□□□ -0.49
HMGB2-205ENST00000511316 SIM1P81133 766 aaPredicted RBP12.02□□□□□ -0.49
HMGB2-205ENST00000511316 TMEM115Q12893 351 aaPredicted RBP12.02□□□□□ -0.49
HMGB2-205ENST00000511316 RPA4Q13156 261 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms