RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CLDN15P56746 228 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 CLDN20P56880 219 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 KIAA0040Q15053 153 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 PON3Q15166 354 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 GRAMD1BQ3KR37 738 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 GALNT10Q86SR1 603 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 EXOC3L1Q86VI1 746 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 TDRPQ86YL5 185 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 ZBED6CLQ96FA7 236 aaPredicted RBP13.87□□□□□ -0.19
TPM3-219ENST00000509409 WFIKKN1Q96NZ8 548 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 TSSK3Q96PN8 268 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 MED18Q9BUE0 208 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 REEP4Q9H6H4 257 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 PPCSQ9HAB8 311 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 KLHL28Q9NXS3 571 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 ZNF226Q9NYT6 803 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 C6orf203Q9P0P8 240 aaPredicted RBP13.87□□□□□ -0.19
TPM3-219ENST00000509409 BAIAP2L1Q9UHR4 511 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 CCL27Q9Y4X3 112 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 AP4B1Q9Y6B7 739 aa13.87□□□□□ -0.19
TPM3-219ENST00000509409 SHISA8B8ZZ34 492 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 NDUFB5O43674 189 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 IGKV1D-16P01601 117 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 PRPH2P23942 346 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 PRR5P85299 388 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 GALNTL6Q49A17 601 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 ZNF474Q6S9Z5 364 aaPredicted RBP13.86□□□□□ -0.19
TPM3-219ENST00000509409 APOOLQ6UXV4 268 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 Q6ZSR9 355 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 DDIASQ8IXT1 998 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 CDRT4Q8N9R6 151 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 CLHC1Q8NHS4 586 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 FBXO30Q8TB52 745 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 FNDC9Q8TBE3 224 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 EPS8L3Q8TE67 593 aaKnown RBP13.86□□□□□ -0.19
TPM3-219ENST00000509409 CHMP6Q96FZ7 201 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 GATA5Q9BWX5 397 aaPredicted RBP13.86□□□□□ -0.19
TPM3-219ENST00000509409 GSX1Q9H4S2 264 aaPredicted RBP13.86□□□□□ -0.19
TPM3-219ENST00000509409 ELOVL5Q9NYP7 299 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 PROCRQ9UNN8 238 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 VDAC3Q9Y277 283 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 ZNF175Q9Y473 711 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 TESMINQ9Y4I5 508 aa13.86□□□□□ -0.19
TPM3-219ENST00000509409 EIF1AYO14602 144 aaKnown RBP13.85□□□□□ -0.19
TPM3-219ENST00000509409 EMC8O43402 210 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 TRIM13O60858 407 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 NKX2-2O95096 273 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 IFI6P09912 130 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 NEFHP12036 1026 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 FOSL1P15407 271 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 HPGDP15428 266 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 CD53P19397 219 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 EIF1AXP47813 144 aaKnown RBP13.85□□□□□ -0.19
TPM3-219ENST00000509409 RPL38P63173 70 aaKnown RBP13.85□□□□□ -0.19
TPM3-219ENST00000509409 FGFBP1Q14512 234 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 RFTN2Q52LD8 501 aaPredicted RBP13.85□□□□□ -0.19
TPM3-219ENST00000509409 ZNF385BQ569K4 471 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 FIGNL1Q6PIW4 674 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 EIF1ADQ8N9N8 165 aaKnown RBP13.85□□□□□ -0.19
TPM3-219ENST00000509409 ZNF610Q8N9Z0 462 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 GATSQ8NAP1 163 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 LRRN4CLQ8ND94 238 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 WFDC11Q8NEX6 87 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 PIK3IP1Q96FE7 263 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 ZC3HAV1LQ96H79 300 aaKnown RBP13.85□□□□□ -0.19
TPM3-219ENST00000509409 CCT7Q99832 543 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 KLHL4Q9C0H6 718 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 HHATLQ9HCP6 504 aa13.85□□□□□ -0.19
TPM3-219ENST00000509409 BEX4Q9NWD9 120 aaPredicted RBP13.85□□□□□ -0.19
TPM3-219ENST00000509409 ZNF469Q96JG9 3925 aaPredicted RBP13.84□□□□□ -0.19
TPM3-219ENST00000509409 A0A1W2PPR1 153 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 C16orf97H3BN30 126 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 CTIFO43310 598 aaKnown RBP13.84□□□□□ -0.19
TPM3-219ENST00000509409 PLGP00747 810 aaPredicted RBP13.84□□□□□ -0.19
TPM3-219ENST00000509409 OPN1LWP04000 364 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 ALOX5P09917 674 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 DDX5P17844 614 aaKnown RBP13.84□□□□□ -0.19
TPM3-219ENST00000509409 SDC1P18827 310 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 EFNA1P20827 205 aaPredicted RBP13.84□□□□□ -0.19
TPM3-219ENST00000509409 NKX6-1P78426 367 aaPredicted RBP13.84□□□□□ -0.19
TPM3-219ENST00000509409 SLC18A2Q05940 514 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 EXOC3L2Q2M3D2 409 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 R3HCC1LQ7Z5L2 792 aaKnown RBP13.84□□□□□ -0.19
TPM3-219ENST00000509409 WDR75Q8IWA0 830 aaKnown RBP13.84□□□□□ -0.19
TPM3-219ENST00000509409 METTL25Q8N6Q8 603 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 OR6Y1Q8NGX8 325 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 OR2T11Q8NH01 316 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 OR4C3Q8NH37 302 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 JADE3Q92613 823 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 TRIM44Q96DX7 344 aaPredicted RBP13.84□□□□□ -0.19
TPM3-219ENST00000509409 C16orf58Q96GQ5 468 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 POM121Q96HA1 1249 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 TRMOQ9BU70 441 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 TUBB1Q9H4B7 451 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 RNF122Q9H9V4 155 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 TMED5Q9Y3A6 229 aa13.84□□□□□ -0.19
TPM3-219ENST00000509409 A0A087WZY1 265 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 IGLV3-32A0A0A0MS00 114 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 ALG1L2C9J202 215 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 NPIPB8E9PQR5 432 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms