RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 NRN1Q9NPD7 142 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 SOHLH2Q9NX45 425 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 SEC14L4Q9UDX3 406 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 IL20RAQ9UHF4 553 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 KLK13Q9UKR3 277 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 SPATA2Q9UM82 520 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 SLC9A8Q9Y2E8 581 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 Q9Y3F1 56 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 MTCH2Q9Y6C9 303 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 STYXL1Q9Y6J8 313 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 DOCK2Q92608 1830 aa4.76□□□□□ -1.65
HERC4-213ENST00000506515 ZMYM6O95789 1325 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 PLXNA1Q9UIW2 1896 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 TRANK1O15050 2925 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 PHIPQ8WWQ0 1821 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 A0A1B0GTH9 108 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 BICDL2A1A5D9 508 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 RASGRF2O14827 1237 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 FLOT1O75955 427 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 SEMA4FO95754 770 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 PTBP3O95758 552 aaKnown RBP4.75□□□□□ -1.65
HERC4-213ENST00000506515 PGK1P00558 417 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 IGHV3-13P01766 116 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 ASGR1P07306 291 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 GSTA1P08263 222 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 FCGR3AP08637 254 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 GHRP10912 638 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 MAT2AP31153 395 aaKnown RBP4.75□□□□□ -1.65
HERC4-213ENST00000506515 NUMBP49757 651 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 GMFBP60983 142 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 TIMM10P62072 90 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 ZKSCAN8Q15776 578 aaPredicted RBP4.75□□□□□ -1.65
HERC4-213ENST00000506515 IL23RQ5VWK5 629 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 ZCCHC12Q6PEW1 402 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 FAM159AQ6UWV7 190 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 DPY19L2P2Q6ZN68 376 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 RBM43Q6ZSC3 357 aaKnown RBP4.75□□□□□ -1.65
HERC4-213ENST00000506515 TMEM179Q6ZVK1 233 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 AMZ2Q86W34 360 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 PHC2Q8IXK0 858 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 TRPV1Q8NER1 839 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 RASL10AQ92737 203 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 EGLN1Q9GZT9 426 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 RAB17Q9H0T7 212 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 FAM124BQ9H5Z6 455 aaPredicted RBP4.75□□□□□ -1.65
HERC4-213ENST00000506515 RPAP3Q9H6T3 665 aaPredicted RBP4.75□□□□□ -1.65
HERC4-213ENST00000506515 GNB4Q9HAV0 340 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 ADGRL4Q9HBW9 690 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 PLEKHA6Q9Y2H5 1048 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 CLCA3PQ9Y6N3 262 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 ZNFX1Q9P2E3 1918 aaKnown RBP4.75□□□□□ -1.65
HERC4-213ENST00000506515 LOC285556D6RIA3 1793 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 ROBO3Q96MS0 1386 aa4.75□□□□□ -1.65
HERC4-213ENST00000506515 PRRC2BQ5JSZ5 2229 aaKnown RBP4.74□□□□□ -1.65
HERC4-213ENST00000506515 UBE4BO95155 1302 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 PLXNB2O15031 1838 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 PCNX3Q9H6A9 2034 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 MAST2Q6P0Q8 1798 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 IGHV3-16A0A0C4DH30 117 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 ACOD1A6NK06 481 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 OAS1P00973 400 aaKnown RBP4.74□□□□□ -1.65
HERC4-213ENST00000506515 MT-ND1P03886 318 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 HCKP08631 526 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 RALAP11233 206 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 HSD17B1P14061 328 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 UCP1P25874 307 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 PPP2R1BP30154 601 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 MAGEA4P43358 317 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 SLC6A8P48029 635 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 CAMLGP49069 296 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 SLC7A2P52569 658 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 SHROOM1Q2M3G4 852 aaPredicted RBP4.74□□□□□ -1.65
HERC4-213ENST00000506515 FAM182AQ5T1J6 154 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 REG3GQ6UW15 175 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 FAM43BQ6ZT52 329 aaPredicted RBP4.74□□□□□ -1.65
HERC4-213ENST00000506515 SLC47A2Q86VL8 602 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 CNNM3Q8NE01 707 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 C17orf47Q8NEP4 570 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 FCGR1BQ92637 280 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 RBM24Q9BX46 236 aaKnown RBP4.74□□□□□ -1.65
HERC4-213ENST00000506515 TEX13BQ9BXU2 312 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 RNF41Q9H4P4 317 aaPredicted RBP4.74□□□□□ -1.65
HERC4-213ENST00000506515 AATFQ9NY61 560 aaKnown RBP eCLIP4.74□□□□□ -1.65
HERC4-213ENST00000506515 LTBP2Q14767 1821 aa4.74□□□□□ -1.65
HERC4-213ENST00000506515 RAD50Q92878 1312 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 A0A0A6YYD4 124 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 A0A1W2PPR1 153 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 MPHOSPH10O00566 681 aaKnown RBP4.73□□□□□ -1.65
HERC4-213ENST00000506515 CYB561D2O14569 222 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 EI24O14681 340 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 GALR3O60755 368 aaPredicted RBP4.73□□□□□ -1.65
HERC4-213ENST00000506515 CRLF1O75462 422 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 CNMDO75829 334 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 TBX6O95947 436 aaPredicted RBP4.73□□□□□ -1.65
HERC4-213ENST00000506515 PTPN4P29074 926 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 PRDX2P32119 198 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 GABPB1Q06547 395 aaPredicted RBP4.73□□□□□ -1.65
HERC4-213ENST00000506515 SNX1Q13596 522 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 CEBPEQ15744 281 aa4.73□□□□□ -1.65
HERC4-213ENST00000506515 ANKRD55Q3KP44 614 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms