RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 TNFP01375 233 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 CFL1P23528 166 aaKnown RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 DNASE1P24855 282 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 C1orf61Q13536 156 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 PUM1Q14671 1186 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 LTB4RQ15722 352 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 TP53I3Q53FA7 332 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 SYT14P1Q58G82 188 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 SFRP4Q6FHJ7 346 aaPredicted RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 ACSM5Q6NUN0 579 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 MTFR2Q6P444 385 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 ZNF761Q86XN6 746 aaPredicted RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 CSNK1A1LQ8N752 337 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 VN1R2Q8NFZ6 395 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 NXPE3Q969Y0 559 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 TRIM2Q9C040 744 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 PITHD1Q9GZP4 211 aaPredicted RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 C11orf54Q9H0W9 315 aaPredicted RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 MED20Q9H944 212 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 ELL3Q9HB65 397 aaPredicted RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 RASD1Q9Y272 281 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 YARS2Q9Y2Z4 477 aaKnown RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 UGT2A1Q9Y4X1 527 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 PLXNB2O15031 1838 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 TMEM150CB9EJG8 249 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 HMGN4O00479 90 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 SOX30O94993 753 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 KLF8O95600 359 aaPredicted RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 ATP5A1P25705 553 aaKnown RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 TGFBR2P37173 567 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 TGM4P49221 684 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 CLDN2P57739 230 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 PUS10Q3MIT2 529 aaKnown RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 C4orf46Q504U0 113 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 TECPR1Q7Z6L1 1165 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 FGF13Q92913 245 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 FKBP10Q96AY3 582 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 SGPP1Q9BX95 441 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 PPIL3Q9H2H8 161 aaKnown RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 ADAM29Q9UKF5 820 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 LOC105369274A0A096LPK9 316 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 CENPBD1B2RD01 187 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 TPD52L2O43399 206 aaKnown RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 CXCR1P25024 350 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 GABRA5P31644 462 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 GNALP38405 381 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 TSPAN5P62079 268 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 CSNK1G2P78368 415 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 ANKRD54Q6NXT1 300 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 RPTNQ6XPR3 784 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 ZNF782Q6ZMW2 699 aaPredicted RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 ZNF550Q7Z398 422 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 OR4N4Q8N0Y3 316 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 OR6C4Q8NGE1 309 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 S100A13Q99584 98 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 SRA1Q9HD15 236 aaKnown RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 BABAM2Q9NXR7 383 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 C2orf74A8MZ97 194 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 KHNYNO15037 678 aaKnown RBP12.44□□□□□ -0.42
SPCS3-201ENST00000503362 CTSLP07711 333 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 MAP3K8P41279 467 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 PITPNBP48739 271 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 REEP5Q00765 189 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 CLDN22Q8N7P3 220 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 NANOGP1Q8N7R0 232 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 CREB3L1Q96BA8 519 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 VN1R3Q9BXE9 311 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 IL21RQ9HBE5 538 aa12.44□□□□□ -0.42
SPCS3-201ENST00000503362 TEX13CA0A0J9YWL9 993 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 WASHC1A8K0Z3 465 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 SCDO00767 359 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 IFNA6P05013 189 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 CSN2P05814 226 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 H2AFB2P0C5Z0 115 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 LCN1P31025 176 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 SF3A2Q15428 464 aaKnown RBP12.43□□□□□ -0.42
SPCS3-201ENST00000503362 DEFB110Q30KQ9 67 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 ARHGAP11AQ6P4F7 1023 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 WASH2PQ6VEQ5 465 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 ZER1Q7Z7L7 766 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 MFSD4AQ8N468 514 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 OR6N2Q8NGY6 317 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 NEDD4LQ96PU5 975 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 THAP7Q9BT49 309 aaPredicted RBP12.43□□□□□ -0.42
SPCS3-201ENST00000503362 OR8D2Q9GZM6 311 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 SH2B3Q9UQQ2 575 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 PAPPA2Q9BXP8 1791 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 TRAV27A0A087WT01 109 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 FXYD6-FXYD2A0A087WZ82 144 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 KLHL18O94889 574 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 TGM1P22735 817 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 ETV5P41161 510 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 ETV1P50549 477 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 RAE1P78406 368 aaKnown RBP12.43□□□□□ -0.42
SPCS3-201ENST00000503362 SAXO2Q658L1 398 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 ZNF627Q7L945 461 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 PLPP6Q8IY26 295 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 NSMAFQ92636 917 aa12.43□□□□□ -0.42
SPCS3-201ENST00000503362 BPIFA2Q96DR5 249 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms