RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 RHOJQ9H4E5 214 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 RNF41Q9H4P4 317 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 MEAF6Q9HAF1 191 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 ADGRL4Q9HBW9 690 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 ESM1Q9NQ30 184 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 DCAF16Q9NXF7 216 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 WWOXQ9NZC7 414 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 RAI14Q9P0K7 980 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 C6orf203Q9P0P8 240 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 EXOSC1Q9Y3B2 195 aaKnown RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 AUP1Q9Y679 476 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 SPHKAPQ2M3C7 1700 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 ATP10DQ9P241 1426 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 ANKRD50Q9ULJ7 1429 aa4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 RPRD2Q5VT52 1461 aaKnown RBP4.37□□□□□ -1.71
HMGB1P3-201ENST00000502802 PHLPP1O60346 1717 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 PRR23AA6NEV1 266 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 MFSD2BA6NFX1 497 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZSCAN12O43309 604 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 NUDT21O43809 227 aaKnown RBP4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 GPRIN2O60269 458 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 SORBS2O94875 1100 aaKnown RBP4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 NUDT14O95848 222 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 ANXA3P12429 323 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 HSD17B1P14061 328 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 HNF1AP20823 631 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 NT5EP21589 574 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 STK19P49842 368 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 UBE2V2Q15819 145 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 SEL1L3Q68CR1 1132 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 PYHIN1Q6K0P9 492 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 ADAMTSL5Q6ZMM2 481 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 RPAINQ86UA6 219 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 PARGQ86W56 976 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 SPEM1Q8N4L4 309 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 NANPQ8TBE9 248 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 TRMT10AQ8TBZ6 339 aaKnown RBP4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 CTNNBL1Q8WYA6 563 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 GTF3AQ92664 365 aaKnown RBP4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 TADA1Q96BN2 335 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 PRICKLE1Q96MT3 831 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 PSKH2Q96QS6 385 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 COMMD4Q9H0A8 199 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 SLC25A51Q9H1U9 297 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 GSTK1Q9Y2Q3 226 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 ASB3Q9Y575 518 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 KIF1BO60333 1816 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 GRIN2DO15399 1336 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 SALL1Q9NSC2 1324 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZFYVE9O95405 1425 aa4.36□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZSCAN5CA6NGD5 496 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 KRTAP29-1A8MX34 341 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 UBXN8O00124 270 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 TM9SF1O15321 606 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 DCXO43602 365 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 IDH3BO43837 385 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 EDIL3O43854 480 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 SNNO75324 88 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 OPN1LWP04000 364 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 TPM2P07951 284 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 CPN1P15169 458 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 H2AFXP16104 143 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 UQCRC2P22695 453 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 SLC1A4P43007 532 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 DHPSP49366 369 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 EMDP50402 254 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 HYAL1Q12794 435 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 RAB35Q15286 201 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 MAPK6Q16659 721 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 KRTAP24-1Q3LI83 254 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 RABL6Q3YEC7 729 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 LINC00242Q5T6M2 205 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 SLX4IPQ5VYV7 408 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 TTC23Q5W5X9 447 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 PMF1Q6P1K2 205 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 ANKRD37Q7Z713 158 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 Q8NBF4 154 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 MYLPFQ96A32 169 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 RAB3CQ96E17 227 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 OMDQ99983 421 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 SLC30A2Q9BRI3 323 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 FEM1AQ9BSK4 669 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 TCHPQ9BT92 498 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 NFKBIZQ9BYH8 718 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 FGFBP2Q9BYJ0 223 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 ELOVL3Q9HB03 270 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 NUDT4Q9NZJ9 180 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 SPATA2Q9UM82 520 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 TMEM94Q12767 1356 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 NRXN3Q9Y4C0 1643 aa4.35□□□□□ -1.71
HMGB1P3-201ENST00000502802 IGLV4-3A0A075B6K6 122 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 TEX48A0A1B0GUV7 120 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 ESYT2A0FGR8 921 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 FAM74A7A6NL05 159 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 C11orf98E9PRG8 122 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 TYROBPO43914 113 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 STX11O75558 287 aa4.34□□□□□ -1.71
HMGB1P3-201ENST00000502802 ZNF10P21506 573 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms