RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 CRB1P82279 1406 aa0.65□□□□□ -2.3
SGMS1-205ENST00000498514 CPS1P31327 1500 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 ARAP3Q8WWN8 1544 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 RNF17Q9BXT8 1623 aaKnown RBP0.65□□□□□ -2.31
SGMS1-205ENST00000498514 DHRS7CA6NNS2 312 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 C11orf98E9PRG8 122 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 CYB561D2O14569 222 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 SPAG7O75391 227 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 FCER2P06734 321 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 NR2F1P10589 423 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 NPBWR1P48145 328 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 PTENP60484 403 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 ACTA2P62736 377 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 ACTC1P68032 377 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 IL18R1Q13478 541 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 HAGHQ16775 308 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 FAM83EQ2M2I3 478 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 OR5M10Q6IEU7 315 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 STEAP1BQ6NZ63 245 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 ASCL5Q7RTU5 278 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 DNAJB7Q7Z6W7 309 aaPredicted RBP0.65□□□□□ -2.31
SGMS1-205ENST00000498514 DUSP18Q8NEJ0 188 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 OR6X1Q8NH79 312 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 FRZBQ92765 325 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 RMDN1Q96DB5 314 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 LYSTQ99698 3801 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 AGPAT1Q99943 283 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 PELOQ9BRX2 385 aaKnown RBP0.65□□□□□ -2.31
SGMS1-205ENST00000498514 FUT8Q9BYC5 575 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 MRPL17Q9NRX2 175 aaKnown RBP0.65□□□□□ -2.31
SGMS1-205ENST00000498514 RBAKQ9NYW8 714 aaPredicted RBP0.65□□□□□ -2.31
SGMS1-205ENST00000498514 WDR35Q9P2L0 1181 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 TUBGCP4Q9UGJ1 667 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 GPR34Q9UPC5 381 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 HSPG2P98160 4391 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 IFT140Q96RY7 1462 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 RAPGEF2Q9Y4G8 1499 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 PRRC2BQ5JSZ5 2229 aaKnown RBP0.65□□□□□ -2.31
SGMS1-205ENST00000498514 BRWD1Q9NSI6 2320 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 SHPRHQ149N8 1683 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 ZC3H13Q5T200 1668 aaKnown RBP0.65□□□□□ -2.31
SGMS1-205ENST00000498514 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
SGMS1-205ENST00000498514 ACANP16112 2415 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 RBBP6Q7Z6E9 1792 aaKnown RBP0.65□□□□□ -2.31
SGMS1-205ENST00000498514 COL7A1Q02388 2944 aa0.65□□□□□ -2.31
SGMS1-205ENST00000498514 PASKQ96RG2 1323 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 ARHGEF12Q9NZN5 1544 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 FAT2Q9NYQ8 4349 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 PPIAL4EA0A075B759 164 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 NPIPA5A0A0B4J1W7 369 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 PPIAL4CA0A0B4J2A2 164 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 IGHV3-64DA0A0J9YX35 117 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 SH3PXD2BA1X283 911 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 ANKRD18BA2A2Z9 1011 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 PSMB11A5LHX3 300 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 NPIPA5E9PKD4 350 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 PPIAL4DF5H284 164 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 CCDC188H7C350 402 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 BET1O15155 118 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 PPIAL4FP0DN26 164 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 PTBP1P26599 531 aaKnown RBP eCLIP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 HAND2P61296 217 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 CAMK4Q16566 473 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 CDO1Q16878 200 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 ZNF674Q2M3X9 581 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 OLFM4Q6UX06 510 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 TMEM182Q6ZP80 229 aaPredicted RBP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 OCC1Q8TAD7 63 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 UBALD1Q8TB05 177 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 S1PR3Q99500 378 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 ATG101Q9BSB4 218 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 IDI2Q9BXS1 227 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 CCDC68Q9H2F9 335 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 TPK1Q9H3S4 243 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 ZHX3Q9H4I2 956 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 DCTPP1Q9H773 170 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 BLOC1S4Q9NUP1 217 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 TECRQ9NZ01 308 aaKnown RBP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 BCCIPQ9P287 314 aaKnown RBP eCLIP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 COL1A1P02452 1464 aaPredicted RBP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 MROH2BQ7Z745 1585 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 KMT2DO14686 5537 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 APOBP04114 4563 aaKnown RBP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 MUC12Q9UKN1 5478 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 COL5A3P25940 1745 aaPredicted RBP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 SHROOM2Q13796 1616 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 PHRF1Q9P1Y6 1649 aaKnown RBP0.64□□□□□ -2.31
SGMS1-205ENST00000498514 ZMYM4Q5VZL5 1548 aa0.64□□□□□ -2.31
SGMS1-205ENST00000498514 STARD9Q9P2P6 4700 aa0.63□□□□□ -2.31
SGMS1-205ENST00000498514 WNK1Q9H4A3 2382 aa0.63□□□□□ -2.31
SGMS1-205ENST00000498514 VPS13DQ5THJ4 4388 aa0.63□□□□□ -2.31
SGMS1-205ENST00000498514 ITSN2Q9NZM3 1697 aa0.63□□□□□ -2.31
SGMS1-205ENST00000498514 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
SGMS1-205ENST00000498514 TEX14Q8IWB6 1497 aa0.63□□□□□ -2.31
SGMS1-205ENST00000498514 PKHD1L1Q86WI1 4243 aa0.63□□□□□ -2.31
SGMS1-205ENST00000498514 TMEM94Q12767 1356 aa0.63□□□□□ -2.31
SGMS1-205ENST00000498514 PNPLA6Q8IY17 1366 aa0.63□□□□□ -2.31
SGMS1-205ENST00000498514 A8MUA0 341 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms