RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PRKAR1BP31321 381 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 PTDSS1P48651 473 aaKnown RBP13.1□□□□□ -0.31
VPS26A-209ENST00000497564 SESN3P58005 492 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 RPS15P62841 145 aaKnown RBP13.1□□□□□ -0.31
VPS26A-209ENST00000497564 KCNC4Q03721 635 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 DNASE1L3Q13609 305 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 LINC00303Q3SY05 128 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 ATP1A1-AS1Q5TC04 95 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 OGFRL1Q5TC84 451 aaPredicted RBP13.1□□□□□ -0.31
VPS26A-209ENST00000497564 OLIG3Q7RTU3 272 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 ZDHHC21Q8IVQ6 265 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 SMYD1Q8NB12 490 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 GPR32P1Q8NGA4 272 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 OR10Q1Q8NGQ4 319 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 NUBPLQ8TB37 319 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 SPPL2AQ8TCT8 520 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 NRG4Q8WWG1 115 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 HSPBAP1Q96EW2 488 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 ZNF354BQ96LW1 612 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 GPN2Q9H9Y4 310 aaPredicted RBP13.1□□□□□ -0.31
VPS26A-209ENST00000497564 DNAJB9Q9UBS3 223 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 ZNF223Q9UK11 482 aaPredicted RBP13.1□□□□□ -0.31
VPS26A-209ENST00000497564 HS3ST3B1Q9Y662 390 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 COL6A6A6NMZ7 2263 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 CPAMD8Q8IZJ3 1885 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 AGAP5A6NIR3 686 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 NPIPB9F8W1W9 429 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 SOCS6O14544 535 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 CLOCKO15516 846 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 PEX1O43933 1283 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 TPST1O60507 370 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 LGI1O95970 557 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 IGKV1D-16P01601 117 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 DBIP07108 87 aaKnown RBP13.09□□□□□ -0.31
VPS26A-209ENST00000497564 COX6A1P12074 109 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 VHLP40337 213 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 PSMD4P55036 377 aaKnown RBP13.09□□□□□ -0.31
VPS26A-209ENST00000497564 RNF4P78317 190 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 VLDLRP98155 873 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 SSPNQ14714 243 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 EXT1Q16394 746 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 DECR1Q16698 335 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 CCNJQ5T5M9 372 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 HLA-DQA1Q5Y7H0 255 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 HSDL2Q6YN16 418 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 PEX5LQ8IYB4 626 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 BCORP1Q8N888 145 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 EXD3Q8N9H8 876 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 CATSPER1Q8NEC5 780 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 OR4N2Q8NGD1 307 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 OR52P1PQ8NH57 321 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 PROX1Q92786 737 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 PCSK5Q92824 1860 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 C8orf44Q96CB5 159 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 IMMP1LQ96LU5 166 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 MESP1Q9BRJ9 268 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 BDH2Q9BUT1 245 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 NXF5Q9H1B4 397 aaKnown RBP13.09□□□□□ -0.31
VPS26A-209ENST00000497564 EVA1AQ9H8M9 152 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 MRTO4Q9UKD2 239 aaKnown RBP13.09□□□□□ -0.31
VPS26A-209ENST00000497564 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 ZNF232Q9UNY5 417 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 OR10H1Q9Y4A9 318 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 PCDHGA6Q9Y5G7 932 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 EML6Q6ZMW3 1958 aa13.09□□□□□ -0.31
VPS26A-209ENST00000497564 PRAMEF25A6NGN4 478 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 SEC24DO94855 1032 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-209ENST00000497564 IL33O95760 270 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 EPPINO95925 133 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 MT-ND1P03886 318 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 PRKAR1AP10644 381 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ITGA2P17301 1181 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ATP6V1C1P21283 382 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 LARS2Q15031 903 aaKnown RBP13.08□□□□□ -0.32
VPS26A-209ENST00000497564 TRIP10Q15642 601 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ZNF141Q15928 474 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 TBR1Q16650 682 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 NRF1Q16656 503 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ZSWIM7Q19AV6 140 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 EIPR1Q53HC9 387 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ZNF311Q5JNZ3 666 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 RNF220Q5VTB9 566 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 FAM69BQ5VUD6 431 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 FIGNL1Q6PIW4 674 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 KIRREL2Q6UWL6 708 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 NDUFAF7Q7L592 441 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 PPP1R32Q7Z5V6 425 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 TSEN54Q7Z6J9 526 aaKnown RBP13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ZAR1Q86SH2 424 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 AMIGO2Q86SJ2 522 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 SLC34A3Q8N130 599 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 OR11G2Q8NGC1 345 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 M1APQ8TC57 530 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ELP5Q8TE02 316 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ZG16BQ96DA0 208 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 VPS50Q96JG6 964 aa13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ZNF300Q96RE9 604 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-209ENST00000497564 ZNF347Q96SE7 839 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms