RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 RTP2Q5QGT7 225 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 IDNKQ5T6J7 187 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 CD300LDQ6UXZ3 194 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 GLDNQ6ZMI3 551 aaPredicted RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 BHLHA9Q7RTU4 235 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 FAM122BQ7Z309 247 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 CAMKMTQ7Z624 323 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 LDLRAD3Q86YD5 345 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 ZNF565Q8N9K5 539 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 BEST4Q8NFU0 473 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 OR10K1Q8NGX5 313 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 OR14A16Q8NHC5 309 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 GATAD2BQ8WXI9 593 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 PNPLA2Q96AD5 504 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 ZNF582Q96NG8 517 aaPredicted RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 COPS8Q99627 209 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 LRRN3Q9H3W5 708 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 TCF7L1Q9HCS4 588 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 EXOSC3Q9NQT5 275 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 TEX10Q9NXF1 929 aaPredicted RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 TMEM218A2RU14 115 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 C5orf58C9J3I9 102 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CLDN5O00501 218 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 IMPA2O14732 288 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 IRAK2O43187 625 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 PRODHO43272 600 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 HOXA2O43364 376 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CPSF4O95639 269 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 IFNW1P05000 195 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 EIF4EP06730 217 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 USP17L7P0C7H9 530 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 RPA2P15927 270 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CD53P19397 219 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 PSMB1P20618 241 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 TACR1P25103 407 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 EIF2S3P41091 472 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 STAT5AP42229 794 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 DGKGP49619 791 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 EFNB1P98172 346 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 TNFRSF17Q02223 184 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 SLC10A7Q0GE19 358 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 KLF9Q13886 244 aaPredicted RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 SGO1Q5FBB7 561 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 ALG1LQ6GMV1 187 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 LINGO4Q6UY18 593 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 LINC00471Q8N535 108 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 OXR1Q8N573 874 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 EID2Q8N6I1 236 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 AUTS2Q8WXX7 1259 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 PHYHIPLQ96FC7 376 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CMTM3Q96MX0 182 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CMSS1Q9BQ75 279 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 POLR1EQ9GZS1 481 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 BARX1Q9HBU1 254 aaPredicted RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 WWOXQ9NZC7 414 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 SLC9A8Q9Y2E8 581 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CARHSP1Q9Y2V2 147 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 NLRC5Q86WI3 1866 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 PRRC2BQ5JSZ5 2229 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 PRAMEF25A6NGN4 478 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 MCIDASD6RGH6 385 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 TO15178 435 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CREBL2O60519 120 aaPredicted RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 PDYNP01213 254 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CRYBA1P05813 215 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 COX7A2P14406 83 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CNR1P21554 472 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 PTGFRP43088 359 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 SRP9P49458 86 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 RNF144AP50876 292 aaPredicted RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 CCR6P51684 374 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 DLX5P56178 289 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 AP3S2P59780 193 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 MAXP61244 160 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 SERTAD2Q14140 314 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 IHHQ14623 411 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 ZNF630Q2M218 657 aaPredicted RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 MINDY4Q4G0A6 757 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 ARTNQ5T4W7 220 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 GPRC6AQ5T6X5 926 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 OR2G6Q5TZ20 316 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 PRAMEF13Q5VWM6 474 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 NOXRED1Q6NXP6 359 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 LRRN1Q6UXK5 716 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 SLC16A13Q7RTY0 426 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 PUSL1Q8N0Z8 303 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 MEIOBQ8N635 442 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 HAVCR2Q8TDQ0 301 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 EDARADDQ8WWZ3 215 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 FGF11Q92914 225 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 RNFT2Q96EX2 444 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 FCRL2Q96LA5 508 aaPredicted RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 CRB3Q9BUF7 120 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 POLR2J3Q9H1A7 115 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 SLC38A1Q9H2H9 487 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 SARS2Q9NP81 518 aaKnown RBP8.51□□□□□ -1.05
HPS4-217ENST00000496385 TAS2R5Q9NYW4 299 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 CAMK2AQ9UQM7 478 aa8.51□□□□□ -1.05
HPS4-217ENST00000496385 A0A1W2PPC1 479 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SHISA3A0PJX4 238 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms