RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 CRLF1O75462 422 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 OR4F21O95013 312 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 THBDP07204 575 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 PSMB1P20618 241 aaKnown RBP13.47□□□□□ -0.25
NUP58-214ENST00000495460 TIA1P31483 386 aaKnown RBP eCLIP13.47□□□□□ -0.254e-7■■■■□ 23.2
NUP58-214ENST00000495460 MAP3K8P41279 467 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 CLDN20P56880 219 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 C2orf54Q08AI8 447 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 ZNHIT3Q15649 155 aaPredicted RBP13.47□□□□□ -0.25
NUP58-214ENST00000495460 GTF2IRD2BQ6EKJ0 949 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 FAM180BQ6P0A1 224 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 STAC2Q6ZMT1 411 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 GPRIN3Q6ZVF9 776 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 GTF2IRD2Q86UP8 949 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 SLC22A9Q8IVM8 553 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 UBQLNLQ8IYU4 475 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 MRRFQ96E11 262 aaKnown RBP13.47□□□□□ -0.25
NUP58-214ENST00000495460 ZNF764Q96H86 408 aaPredicted RBP13.47□□□□□ -0.25
NUP58-214ENST00000495460 BBS4Q96RK4 519 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 ACPTQ9BZG2 426 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 GP6Q9HCN6 339 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 PFDN4Q9NQP4 134 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 MED11Q9P086 117 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 SENP1Q9P0U3 644 aa13.47□□□□□ -0.25
NUP58-214ENST00000495460 USF3Q68DE3 2245 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.46□□□□□ -0.25
NUP58-214ENST00000495460 TRIM64A6NGJ6 449 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 TRIM64BA6NI03 449 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 OVOL3O00110 214 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 UPK1AO00322 258 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 HS3ST1O14792 307 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 SNRPAP09012 282 aaKnown RBP13.46□□□□□ -0.25
NUP58-214ENST00000495460 ANXA4P09525 319 aaPredicted RBP13.46□□□□□ -0.25
NUP58-214ENST00000495460 ETF1P62495 437 aaKnown RBP13.46□□□□□ -0.25
NUP58-214ENST00000495460 RAC1P63000 192 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 ZNF763Q0D2J5 394 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 LCP2Q13094 533 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 CAPRIN1Q14444 709 aaKnown RBP13.46□□□□□ -0.25
NUP58-214ENST00000495460 UNC50Q53HI1 259 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 HEPHL1Q6MZM0 1159 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 ZNF704Q6ZNC4 412 aaPredicted RBP13.46□□□□□ -0.25
NUP58-214ENST00000495460 IKBIPQ70UQ0 350 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 SSX8Q7RTT4 187 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 GGNQ86UU5 652 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 WDR75Q8IWA0 830 aaKnown RBP13.46□□□□□ -0.25
NUP58-214ENST00000495460 HOMEZQ8IX15 550 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 GTPBP8Q8N3Z3 284 aaPredicted RBP13.46□□□□□ -0.25
NUP58-214ENST00000495460 CDYL2Q8N8U2 506 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 EXOSC8Q96B26 276 aaKnown RBP13.46□□□□□ -0.25
NUP58-214ENST00000495460 ZBTB8AQ96BR9 441 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 ELP4Q96EB1 424 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 L3HYPDHQ96EM0 354 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 ADGRG7Q96K78 797 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 PAFAH2Q99487 392 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 GRIP2Q9C0E4 1043 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 ANKRA2Q9H9E1 313 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 NTMQ9P121 344 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 SNX8Q9Y5X2 465 aa13.46□□□□□ -0.25
NUP58-214ENST00000495460 SONP18583 2426 aaKnown RBP13.45□□□□□ -0.26
NUP58-214ENST00000495460 ALG1L2C9J202 215 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 INAFM1C9JVW0 142 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 NPIPB8E9PQR5 432 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 AQP8O94778 261 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 SUPT7LO94864 414 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 HSPA4LO95757 839 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 THBS1P07996 1170 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 PABPC4LP0CB38 370 aaKnown RBP13.45□□□□□ -0.26
NUP58-214ENST00000495460 ATP5F1P24539 256 aaPredicted RBP13.45□□□□□ -0.26
NUP58-214ENST00000495460 PCSK6P29122 969 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 CASQ1P31415 396 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 PRKAA2P54646 552 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 SGCBQ16585 318 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 VPS26BQ4G0F5 336 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 CPTPQ5TA50 214 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 FAM71E1Q6IPT2 247 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 ESPNLQ6ZVH7 1005 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 TRIM46Q7Z4K8 759 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 STK32CQ86UX6 486 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 MISPQ8IVT2 679 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 DCAKDQ8WVC6 231 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 APIPQ96GX9 242 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 KLHL4Q9C0H6 718 aa13.45□□□□□ -0.26
NUP58-214ENST00000495460 IQCGQ9H095 443 aaKnown RBP13.45□□□□□ -0.26
NUP58-214ENST00000495460 DMGDHQ9UI17 866 aaKnown RBP13.45□□□□□ -0.26
NUP58-214ENST00000495460 MCTS1Q9ULC4 181 aaKnown RBP13.45□□□□□ -0.26
NUP58-214ENST00000495460 H0YC42 278 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 KCNH1O95259 989 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 ANGPTL1O95841 491 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 NID1P14543 1247 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 PSMA4P25789 261 aaKnown RBP13.44□□□□□ -0.26
NUP58-214ENST00000495460 HMOX2P30519 316 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 TPD52P55327 224 aaPredicted RBP13.44□□□□□ -0.26
NUP58-214ENST00000495460 CTBP2P56545 445 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 SIRPAP78324 504 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 LCE2CQ5TA81 110 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 ZCCHC12Q6PEW1 402 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 RPS27LQ71UM5 84 aaKnown RBP13.44□□□□□ -0.26
NUP58-214ENST00000495460 ZNF550Q7Z398 422 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 STEAP2Q8NFT2 490 aa13.44□□□□□ -0.26
NUP58-214ENST00000495460 ROBO4Q8WZ75 1007 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms