RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 ERN1O75460 977 aaKnown RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 NPPAP01160 153 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 CD1AP06126 327 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 HEXBP07686 556 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 ZCCHC18P0CG32 403 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SLC35E2P0CK97 266 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 DDX5P17844 614 aaKnown RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 MALP21145 153 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 IL10P22301 178 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SLC6A2P23975 617 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 RBMS1P29558 406 aaKnown RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 NTSP30990 170 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 EMP2P54851 167 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 IGLV3-21P80748 117 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 OCA2Q04671 838 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 STX4Q12846 297 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 HSPB3Q12988 150 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SELPLGQ14242 412 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 CEBPEQ15744 281 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 TRMT5Q32P41 509 aaKnown RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 GFOD2Q3B7J2 385 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SPATS1Q496A3 300 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 RUNDC3AQ59EK9 446 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 RABL3Q5HYI8 236 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 LRIF1Q5T3J3 769 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 LCE4AQ5TA78 99 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 FAAH2Q6GMR7 532 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 NANOGP8Q6NSW7 305 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 C8orf82Q6P1X6 216 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 FAM198BQ6UWH4 519 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 HACD2Q6Y1H2 254 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 ZNF517Q6ZMY9 492 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 YTHDF3Q7Z739 585 aaKnown RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 DHDDSQ86SQ9 333 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SLC15A3Q8IY34 581 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 DEFB107AQ8IZN7 70 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 LRRC25Q8N386 305 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 KIF2BQ8N4N8 673 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 NATD1Q8N6N6 113 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 AMER2Q8N7J2 671 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 ZBTB34Q8NCN2 500 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SIMC1Q8NDZ2 872 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 PLPP5Q8NEB5 264 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 OR9A2Q8NGT5 310 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 GOT1L1Q8NHS2 421 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 PPP1R35Q8TAP8 253 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 ADAMTS18Q8TE60 1221 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 CT55Q8WUE5 264 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 ROPN1LQ96C74 230 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 ZBED6CLQ96FA7 236 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 MAGED4Q96JG8 741 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 CDRT15Q96T59 188 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 CGREF1Q99674 301 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 MESP1Q9BRJ9 268 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 GPATCH1Q9BRR8 931 aaKnown RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 CADM1Q9BY67 442 aaKnown RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 VN1R1Q9GZP7 353 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SLC26A1Q9H2B4 701 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 EPS8L2Q9H6S3 715 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 ANKRA2Q9H9E1 313 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 NANOGQ9H9S0 305 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 PNO1Q9NRX1 252 aaKnown RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SIRT3Q9NTG7 399 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 GIMAP4Q9NUV9 329 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 CMTM6Q9NX76 183 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 TAS2R9Q9NYW1 312 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 VAPAQ9P0L0 249 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 PACSIN3Q9UKS6 424 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 VPS4AQ9UN37 437 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 ENTPD4Q9Y227 616 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 MMACHCQ9Y4U1 282 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 NEUROG3Q9Y4Z2 214 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 IGKV3D-11A0A0A0MRZ8 115 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 TRABD2BA6NFA1 517 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 VSTM5A8MXK1 200 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 CDRT15L2A8MXV6 281 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 IDSB3KWA1 339 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 C9J4A7 227 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 CLIC1O00299 241 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 OR10H2O60403 315 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 HNRNPCL1O60812 293 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 NME6O75414 186 aaPredicted RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 KLF7O75840 302 aaPredicted RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 ANP32DO95626 131 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 IFNA16P05015 189 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 CT62P0C5K7 136 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 TNNI3P19429 210 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 TCN2P20062 427 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 S1PR1P21453 382 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 NT5EP21589 574 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 UQCRC2P22695 453 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 F8A1P23610 371 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 SOAT1P35610 550 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 PGM1P36871 562 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 STT3AP46977 705 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 CCT3P49368 545 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 RASSF2P50749 326 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 SLC7A2P52569 658 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms