RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SERPINB7O75635 380 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 ETS2P15036 469 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 PNLIPRP2P54317 469 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 CXADRP78310 365 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 OC90Q02509 493 aaPredicted RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 GLIPR1L2Q4G1C9 344 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 CRB2Q5IJ48 1285 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 ZNF311Q5JNZ3 666 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 AGAP7PQ5VUJ5 663 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 INO80CQ6PI98 192 aaPredicted RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 ARMC10Q8N2F6 343 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 SLC15A4Q8N697 577 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 RSRC1Q96IZ7 334 aaKnown RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 AGAP4Q96P64 663 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 NODALQ96S42 347 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 RSPO3Q9BXY4 272 aaPredicted RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 SAP130Q9H0E3 1048 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 MTHFD2LQ9H903 347 aaPredicted RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 HPF1Q9NWY4 346 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 PLA2G3Q9NZ20 509 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 ZNF443Q9Y2A4 671 aaPredicted RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 CHD8Q9HCK8 2581 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 AGAP5A6NIR3 686 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 SCO2O43819 266 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 TPST1O60507 370 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 MFN2O95140 757 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 OXSR1O95747 527 aaPredicted RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 PABPC4LP0CB38 370 aaKnown RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 HPGDP15428 266 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 IL7RP16871 459 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 TNFRSF1BP20333 461 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 ZNF791Q3KP31 576 aaPredicted RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 BICRALQ6AI39 1079 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 ZNF836Q6ZNA1 936 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 VTCN1Q7Z7D3 282 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 COMTD1Q86VU5 262 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 HGDQ93099 445 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 HSH2DQ96JZ2 352 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 DCAF13Q9NV06 445 aaKnown RBP17.8■□□□□ 0.44
USP39-218ENST00000493829 ADPRHL2Q9NX46 363 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 ABI3Q9P2A4 366 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 PCDHGA10Q9Y5H3 936 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 TCRBV5S2A0A599 114 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 C17orf51A8MQB3 221 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 SCDO00767 359 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 PRKD3O94806 890 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 ATP12AP54707 1039 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 EFR3AQ14156 821 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 NDUFAF6Q330K2 333 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 CYP4Z2PQ8N1L4 340 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 ARSGQ96EG1 525 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 SEPHS2Q99611 448 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 SPATA5L1Q9BVQ7 753 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 UBQLN4Q9NRR5 601 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 RPS6KA6Q9UK32 745 aa17.79■□□□□ 0.44
USP39-218ENST00000493829 A0A087WV48 116 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 NPIPB9F8W1W9 429 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 SUV39H1O43463 412 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 ENTPD5O75356 428 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 WDPCPO95876 746 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 IFNA14P01570 189 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 DBIP07108 87 aaKnown RBP17.78■□□□□ 0.44
USP39-218ENST00000493829 CD247P20963 164 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 RPS4Y1P22090 263 aaKnown RBP17.78■□□□□ 0.44
USP39-218ENST00000493829 EVI2BP34910 448 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 UCNP55089 124 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 NTRK2Q16620 822 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 DUSP7Q16829 419 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 LIN52Q52LA3 116 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 PRAMEF20Q5VT98 475 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 ISLR2Q6UXK2 745 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 APOOLQ6UXV4 268 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 CBLL1Q75N03 491 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 APLFQ8IW19 511 aaPredicted RBP17.78■□□□□ 0.44
USP39-218ENST00000493829 ZNF527Q8NB42 609 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 GPR32P1Q8NGA4 272 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 APOBEC4Q8WW27 367 aaKnown RBP17.78■□□□□ 0.44
USP39-218ENST00000493829 TBL1XR1Q9BZK7 514 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 ZNF552Q9H707 407 aaPredicted RBP17.78■□□□□ 0.44
USP39-218ENST00000493829 TRIM45Q9H8W5 580 aaPredicted RBP17.78■□□□□ 0.44
USP39-218ENST00000493829 GALNT9Q9HCQ5 603 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 RLIMQ9NVW2 624 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 SAMD4AQ9UPU9 718 aaKnown RBP17.78■□□□□ 0.44
USP39-218ENST00000493829 AURKCQ9UQB9 309 aa17.78■□□□□ 0.44
USP39-218ENST00000493829 URB1O60287 2271 aaKnown RBP17.78■□□□□ 0.44
USP39-218ENST00000493829 C2orf72A6NCS6 295 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 G3V3Y1 287 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 FRS3O43559 492 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 GMFGO60234 142 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 BCAS1O75363 584 aaPredicted RBP17.77■□□□□ 0.44
USP39-218ENST00000493829 MT-ND1P03886 318 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 NAGAP17050 411 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 CASRP41180 1078 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 SOX8P57073 446 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 ACTR3P61158 418 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 LARS2Q15031 903 aaKnown RBP17.77■□□□□ 0.44
USP39-218ENST00000493829 CD226Q15762 336 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 ZNF141Q15928 474 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 MRPL2Q5T653 305 aaKnown RBP17.77■□□□□ 0.44
USP39-218ENST00000493829 FKBP9P1Q75LS8 142 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms