RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CES3Q6UWW8 571 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF534Q76KX8 674 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ARCQ7LC44 396 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 IQCHQ86VS3 1027 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 LMNTD2Q8IXW0 634 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 LSMEM2Q8N112 164 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 KRT222Q8N1A0 295 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 FBXO39Q8N4B4 442 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 DNAJC22Q8N4W6 341 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 TEX26Q8N6G2 289 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ARL10Q8N8L6 244 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 NIPA2Q8N8Q9 360 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF557Q8N988 423 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 RASGEF1AQ8N9B8 481 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 L3MBTL4Q8NA19 623 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF383Q8NA42 475 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 KCTD6Q8NC69 237 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 DENND6BQ8NEG7 585 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 OR10G6Q8NH81 332 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 GSDMBQ8TAX9 411 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ACTL9Q8TC94 416 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CTNNBL1Q8WYA6 563 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 RFFLQ8WZ73 363 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 FAF2Q96CS3 445 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 HDAC11Q96DB2 347 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 COX14Q96I36 57 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 DNAJC1Q96KC8 554 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 FAM81BQ96LP2 452 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 RMDN2Q96LZ7 410 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF830Q96NB3 372 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 TGM7Q96PF1 710 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 MCCC1Q96RQ3 725 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 GFI1Q99684 422 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 HGH1Q9BTY7 390 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 SPATA16Q9BXB7 569 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 NAT10Q9H0A0 1025 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 WWP1Q9H0M0 922 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ABCG4Q9H172 646 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 DENND2DQ9H6A0 471 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 XKR8Q9H6D3 395 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 POLR1BQ9H9Y6 1135 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 SCPEP1Q9HB40 452 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 TRMT1Q9NXH9 659 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 TAS2R10Q9NYW0 307 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 RCOR3Q9P2K3 495 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 SLC2A6Q9UGQ3 507 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 PRR14LQ5THK1 2151 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 INTS1Q8N201 2190 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 SMG1Q96Q15 3661 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 BSNQ9UPA5 3926 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CHD3Q12873 2000 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 USP9XQ93008 2570 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 NAV2Q8IVL1 2488 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 FLNCQ14315 2725 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 MED13LQ71F56 2210 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 ZSCAN5CA6NGD5 496 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 A6NLC8 198 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 USP27XA6NNY8 438 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 IQCF5A8MTL0 148 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PDZK1P1A8MUH7 402 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 H7C0C1 242 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 SMAD9O15198 467 aaKnown RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 HCRTR2O43614 444 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TMCC2O75069 709 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 NDUFS3O75489 264 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TRIM16O95361 564 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TNFP01375 233 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 HIST1H2ABP04908 130 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TPBGLP0DKB5 382 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 THRAP10827 490 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 HIST1H2ADP20671 130 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PSMB5P28074 263 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PDHA2P29803 388 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PEBP1P30086 187 aaKnown RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 CSTF2P33240 577 aaKnown RBP eCLIP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PCK1P35558 622 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 BDKRB1P46663 353 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 UQCRFS1P47985 274 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 ATP5OP48047 213 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 LMAN1P49257 510 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 CLNS1AP54105 237 aaKnown RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 NAP1L1P55209 391 aaKnown RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 EIF3EP60228 445 aaKnown RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 IFI35P80217 286 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 RAD51Q06609 339 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 ABRQ12979 859 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 UBE2V1Q13404 147 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PEX6Q13608 980 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 PIGHQ14442 188 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 POU6F1Q14863 301 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 P2RY6Q15077 328 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TRIP13Q15645 432 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TAZQ16635 292 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 TAF1BQ53T94 588 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-218ENST00000493430 GPRC6AQ5T6X5 926 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 IRGCQ6NXR0 463 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 NEK5Q6P3R8 708 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 KLC3Q6P597 504 aa2.67□□□□□ -1.98
PTCD3-218ENST00000493430 C16orf54Q6UWD8 224 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms