RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ROPN1Q9HAT0 212 aaPredicted RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 GALNT8Q9NY28 637 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 GIMAP2Q9UG22 337 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 PACSIN3Q9UKS6 424 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 EDARQ9UNE0 448 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 INTS1Q8N201 2190 aaKnown RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 HCFC1P51610 2035 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 SPG11Q96JI7 2443 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 A0A1W2PNV4 684 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 OR2M5A3KFT3 312 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 FAM221AA4D161 298 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 H0YC42 278 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 H3BML4 177 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 SCAMP2O15127 329 aaKnown RBP7.46□□□□□ -1.22
LSM2-213ENST00000491421 SEC14L5O43304 696 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 EMC8O43402 210 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 TNFSF13O75888 250 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 SMNDC1O75940 238 aaKnown RBP eCLIP7.46□□□□□ -1.22
LSM2-213ENST00000491421 NKX2-2O95096 273 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 SLU7O95391 586 aaKnown RBP7.46□□□□□ -1.22
LSM2-213ENST00000491421 ANGPTL1O95841 491 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 TGM6O95932 706 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 CRHP06850 196 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 ALOX5P09917 674 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 ACP2P11117 423 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 EPXP11678 715 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 CPOXP36551 454 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 RPL3P39023 403 aaKnown RBP7.46□□□□□ -1.22
LSM2-213ENST00000491421 MAP3K8P41279 467 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 IST1P53990 364 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 TPD52P55327 224 aaPredicted RBP7.46□□□□□ -1.22
LSM2-213ENST00000491421 PRR5P85299 388 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 DAZAP2Q15038 168 aaPredicted RBP7.46□□□□□ -1.22
LSM2-213ENST00000491421 DUSP5Q16690 384 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 XKR7Q5GH72 579 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 OR2A2Q6IF42 318 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 MFSD12Q6NUT3 480 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 CDC20BQ86Y33 519 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 COX18Q8N8Q8 333 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 CNEP1R1Q8N9A8 125 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 SLC16A11Q8NCK7 471 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 OR7A2PQ8NGA2 310 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 OR5M1Q8NGP8 315 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 OR6Y1Q8NGX8 325 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 SMPDL3BQ92485 455 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 JADE3Q92613 823 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 HOXB13Q92826 284 aaPredicted RBP7.46□□□□□ -1.22
LSM2-213ENST00000491421 NINJ1Q92982 152 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 CAVIN3Q969G5 261 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 GIMAP5Q96F15 307 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 OTUB1Q96FW1 271 aaPredicted RBP7.46□□□□□ -1.22
LSM2-213ENST00000491421 CHMP6Q96FZ7 201 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 YIPF4Q9BSR8 244 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 PINK1Q9BXM7 581 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 LIME1Q9H400 295 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 HHATLQ9HCP6 504 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 CCM2LQ9NUG4 571 aaPredicted RBP7.46□□□□□ -1.22
LSM2-213ENST00000491421 NTMQ9P121 344 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 ATP6V1HQ9UI12 483 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 ST6GALNAC2Q9UJ37 374 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 ZNF337Q9Y3M9 751 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 NINQ8N4C6 2090 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 EXPH5Q8NEV8 1989 aa7.46□□□□□ -1.22
LSM2-213ENST00000491421 IGLV3-32A0A0A0MS00 114 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 A0A1W2PRB8 838 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 SH3D21A4FU49 640 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 SHISA8B8ZZ34 492 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 ALG1L2C9J202 215 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 NDUFB5O43674 189 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 TYROBPO43914 113 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 TNFRSF21O75509 655 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 SKAP2O75563 359 aaPredicted RBP7.45□□□□□ -1.22
LSM2-213ENST00000491421 KCNK2O95069 426 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 OXSR1O95747 527 aaPredicted RBP7.45□□□□□ -1.22
LSM2-213ENST00000491421 BPGMP07738 259 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 NGFRP08138 427 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 HPGDP15428 266 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 CREB1P16220 341 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 TBXA2RP21731 343 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 DNASE1P24855 282 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 LCN1P31025 176 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 ARRB2P32121 409 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 SERPINB4P48594 390 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 PRIM2P49643 509 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 SUCLG1P53597 346 aaKnown RBP7.45□□□□□ -1.22
LSM2-213ENST00000491421 CLDN15P56746 228 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 CLDN20P56880 219 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 RPS3AP61247 264 aaKnown RBP7.45□□□□□ -1.22
LSM2-213ENST00000491421 SIRPAP78324 504 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 PTGR1Q14914 329 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 MLC1Q15049 377 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.45□□□□□ -1.22
LSM2-213ENST00000491421 SPDYE7PQ495Y7 208 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 GLYR1Q49A26 553 aaPredicted RBP7.45□□□□□ -1.22
LSM2-213ENST00000491421 C6orf136Q5SQH8 315 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 WDR93Q6P2C0 686 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 ZCCHC12Q6PEW1 402 aa7.45□□□□□ -1.22
LSM2-213ENST00000491421 FIGNL1Q6PIW4 674 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms