RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	OGT	O15294	1046 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	LRCH4	O75427	683 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	KRT33A	O76009	404 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SORBS2	O94875	1100 aa	Known RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ZNF432	O94892	652 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	AP2A2	O94973	939 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PAK4	O96013	591 aa	Predicted RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ACKR3	P25106	362 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	MARCKS	P29966	332 aa	Predicted RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CCND2	P30279	289 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CD86	P42081	329 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	NSF	P46459	744 aa	Known RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	POLR2F	P61218	127 aa	Known RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SNRPD1	P62314	119 aa	Known RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TSTA3	Q13630	321 aa	Predicted RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CARTPT	Q16568	116 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	STX1A	Q16623	288 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CD164L2	Q6UWJ8	174 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SIDT2	Q8NBJ9	832 aa	Known RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	OR5AP2	Q8NGF4	316 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	OR10G8	Q8NGN5	311 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	OR6S1	Q8NH40	331 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	GPR148	Q8TDV2	347 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	GANC	Q8TET4	914 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	AZIN2	Q96A70	460 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	OMA1	Q96E52	524 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	NSMCE2	Q96MF7	247 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PCDHB18P	Q96TA0	734 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ZNF577	Q9BSK1	485 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TDRD1	Q9BXT4	1180 aa	Known RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	DPEP3	Q9H4B8	488 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ZDHHC6	Q9H6R6	413 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ECT2	Q9H8V3	914 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ZDHHC4	Q9NPG8	344 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PLEK2	Q9NYT0	353 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ZNF319	Q9P2F9	582 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	COPS7A	Q9UBW8	275 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FAM153A	Q9UHL3	310 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	OR1A2	Q9Y585	309 aa		4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	INTS1	Q8N201	2190 aa	Known RBP	4.17	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SEC16A	O15027	2179 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476		A0A087WW49	117 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	GSTTP1	A0A1W2PQM5	241 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FAM72C	H0Y354	149 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	MKRN2OS	H3BPM6	223 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	YKT6	O15498	198 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PHF1	O43189	567 aa	Predicted RBP	4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	LRRTM2	O43300	516 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	EPO	P01588	193 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	LYN	P07948	512 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	IL4R	P24394	825 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	HTR1E	P28566	365 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	HERV-K104	P63124	156 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CSNK2B	P67870	215 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	GPR50	Q13585	617 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PDGFRL	Q15198	375 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CEBPE	Q15744	281 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FAM106A	Q4KMX7	169 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	DNAJC21	Q5F1R6	531 aa	Known RBP	4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FAM72A	Q5TYM5	149 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FAM72D	Q6L9T8	149 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	ZCCHC12	Q6PEW1	402 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476		Q6ZSR9	355 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CHMP1B	Q7LBR1	199 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	FAM72B	Q86X60	149 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	KDM8	Q8N371	416 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	CCDC197	Q8NCU1	140 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	GATAD1	Q8WUU5	269 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	MARCH7	Q9H992	704 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TM9SF3	Q9HD45	589 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	SPHK2	Q9NRA0	654 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TRIM10	Q9UDY6	481 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	KCNN3	Q9UGI6	736 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	DNPEP	Q9ULA0	475 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	PPP1R3C	Q9UQK1	317 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	TRIP11	Q15643	1979 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	NEDD4	P46934	1319 aa		4.16	□□□□□ -1.74
SSX2IP-208	ENST00000490476	HHLA1	C9JL84	531 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	SIGLEC5	O15389	551 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TXNL1	O43396	289 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	PRKAB2	O43741	272 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CPNE6	O95741	557 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TGFA	P01135	160 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	PTMA	P06454	111 aa	Known RBP	4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	SFTPB	P07988	381 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	PATE4	P0C8F1	98 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TPBGL	P0DKB5	382 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	ANPEP	P15144	967 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CCNA2	P20248	432 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	RPA1	P27694	616 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	FEN1	P39748	380 aa	Known RBP	4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	CAMLG	P49069	296 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	GEM	P55040	296 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	NLRP11	P59045	1033 aa	Known RBP	4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	GMFB	P60983	142 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	RPL10A	P62906	217 aa	Known RBP	4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	TWF1	Q12792	350 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	HEPACAM	Q14CZ8	416 aa		4.15	□□□□□ -1.75
SSX2IP-208	ENST00000490476	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms