RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SYT10Q6XYQ8 523 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 ZNF497Q6ZNH5 498 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 TMEM17Q86X19 198 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 RNF130Q86XS8 419 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 SLC38A6Q8IZM9 456 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 OR8J1Q8NGP2 316 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 OR13C2Q8NGS9 318 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 FLVCR1-AS1Q8TAF5 88 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 M1APQ8TC57 530 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 FNDC8Q8TC99 324 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 LRRC15Q8TF66 581 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 SLC45A3Q96JT2 553 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 FEM1AQ9BSK4 669 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 TRIM15Q9C019 465 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 TRIM9Q9C026 710 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 APMAPQ9HDC9 416 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 RAB18Q9NP72 206 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 MEPEQ9NQ76 525 aaPredicted RBP3.47□□□□□ -1.85
XRN1-213ENST00000489241 MRPL39Q9NYK5 338 aaKnown RBP3.47□□□□□ -1.85
XRN1-213ENST00000489241 RCOR3Q9P2K3 495 aaPredicted RBP3.47□□□□□ -1.85
XRN1-213ENST00000489241 GALPQ9UBC7 116 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 GNG12Q9UBI6 72 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 NAALAD2Q9Y3Q0 740 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 SLCO1B1Q9Y6L6 691 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 SPACA6W5XKT8 324 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 METTL21EPA6NDL7 271 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 RPL37AP8A6NKH3 93 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 EPM2AB3EWF7 344 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 RAMP1O60894 148 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 POP4O95707 220 aaKnown RBP3.46□□□□□ -1.86
XRN1-213ENST00000489241 IGFBP1P08833 259 aaPredicted RBP3.46□□□□□ -1.86
XRN1-213ENST00000489241 HSD17B1P14061 328 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 ZNF44P15621 663 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 PCMT1P22061 227 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 CALB2P22676 271 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 LMO2P25791 158 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 RPL4P36578 427 aaKnown RBP3.46□□□□□ -1.86
XRN1-213ENST00000489241 NOVA1P51513 510 aaKnown RBP3.46□□□□□ -1.86
XRN1-213ENST00000489241 NTHL1P78549 312 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 PLOD1Q02809 727 aaPredicted RBP3.46□□□□□ -1.86
XRN1-213ENST00000489241 DDX39BQ13838 428 aaKnown RBP3.46□□□□□ -1.86
XRN1-213ENST00000489241 MS4A13Q5J8X5 152 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 C10orf120Q5SQS8 335 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 ZNF772Q68DY9 489 aaPredicted RBP3.46□□□□□ -1.86
XRN1-213ENST00000489241 STAC2Q6ZMT1 411 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 VSTM4Q8IW00 320 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 TMEM123Q8N131 208 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 SYT14Q8NB59 555 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 CNIH3Q8TBE1 160 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 TBCKQ8TEA7 893 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 RNF139Q8WU17 664 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 CRYGNQ8WXF5 182 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 PIGCQ92535 297 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 TUBGCP3Q96CW5 907 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 AMDHD1Q96NU7 426 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 RIT2Q99578 217 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 CAPS2Q9BXY5 557 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 GCOM2Q9BZD3 368 aaPredicted RBP3.46□□□□□ -1.86
XRN1-213ENST00000489241 GFRA4Q9GZZ7 299 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 MAGT1Q9H0U3 335 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 BARX2Q9UMQ3 279 aaPredicted RBP3.46□□□□□ -1.86
XRN1-213ENST00000489241 GMPPBQ9Y5P6 360 aa3.46□□□□□ -1.86
XRN1-213ENST00000489241 SNED1Q8TER0 1413 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 IGHV3-16A0A0C4DH30 117 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 CCDC169A6NNP5 214 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 FOXI3A8MTJ6 420 aaPredicted RBP3.45□□□□□ -1.86
XRN1-213ENST00000489241 A8MXK9 166 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 E9PQ18 207 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ZNF208O43345 1280 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 BCKDHAP12694 445 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 OXTRP30559 389 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 CAPGP40121 348 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ETV5P41161 510 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 TAF6P49848 677 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ARHGDIAP52565 204 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 MAP2K1Q02750 393 aaPredicted RBP3.45□□□□□ -1.86
XRN1-213ENST00000489241 ACY1Q03154 408 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 CD300CQ08708 224 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ELAVL2Q12926 359 aaKnown RBP3.45□□□□□ -1.86
XRN1-213ENST00000489241 C17orf58Q2M2W7 97 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 EXOC3L2Q2M3D2 409 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 C14orf28Q4W4Y0 310 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 C2CD6Q53TS8 623 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 C9orf66Q5T8R8 295 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 REP15Q6BDI9 236 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 TMEM225Q6GV28 225 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ARMCX5Q6P1M9 558 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 SCYL2Q6P3W7 929 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 EMBQ6PCB8 327 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ZYG11AQ6WRX3 759 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 CEACAM19Q7Z692 300 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 CATSPER3Q86XQ3 398 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 KRTAP7-1Q8IUC3 87 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ZNF440Q8IYI8 595 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 UBQLNLQ8IYU4 475 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 LINC01561Q8N1V8 128 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 CLDN19Q8N6F1 224 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 ZNF485Q8NCK3 441 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 BHLHE23Q8NDY6 225 aa3.45□□□□□ -1.86
XRN1-213ENST00000489241 MIPOL1Q8TD10 442 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms