RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 MTBPQ96DY7 904 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 ADAD1Q96M93 576 aaKnown RBP14.39□□□□□ -0.11
USP48-210ENST00000489108 HBEGFQ99075 208 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 TAS2R9Q9NYW1 312 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 SNX12Q9UMY4 172 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 VDAC3Q9Y277 283 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 SNX24Q9Y343 169 aa14.39□□□□□ -0.11
USP48-210ENST00000489108 TNFSF11O14788 317 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 ESRRBO95718 433 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 IGHV4-31P0DP07 118 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 ZNF16P17020 682 aaPredicted RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 CLK3P49761 638 aaKnown RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 TRA2BP62995 288 aaKnown RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 ACAP2Q15057 778 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 FAM83EQ2M2I3 478 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 CYP27C1Q4G0S4 372 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 NUFIP2Q7Z417 695 aaKnown RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 EXOC3L1Q86VI1 746 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 WDR75Q8IWA0 830 aaKnown RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 C1orf52Q8N6N3 182 aaKnown RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 CEP112Q8N8E3 955 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 HTRA1Q92743 480 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 EXOSC8Q96B26 276 aaKnown RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 NSUN5Q96P11 429 aaKnown RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 NPAS1Q99742 590 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 CACNG6Q9BXT2 260 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 ELOVL6Q9H5J4 265 aa14.38□□□□□ -0.11
USP48-210ENST00000489108 FAM120CQ9NX05 1096 aaKnown RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 PAQR5Q9NXK6 330 aaPredicted RBP14.38□□□□□ -0.11
USP48-210ENST00000489108 A0A0J9YW62 118 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 SHISA9B4DS77 424 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 ADAMDEC1O15204 470 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 PLOD3O60568 738 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 ADAP00813 363 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 PDYNP01213 254 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 C2P06681 752 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 IGFBP5P24593 272 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 C17orf67Q0P5P2 114 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 ZNF155Q12901 538 aaPredicted RBP14.37□□□□□ -0.11
USP48-210ENST00000489108 TRAF3Q13114 568 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 AGAP6Q5VW22 663 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 FAM219BQ5XKK7 198 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 GTF2IRD2BQ6EKJ0 949 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 METTL2BQ6P1Q9 378 aaKnown RBP14.37□□□□□ -0.11
USP48-210ENST00000489108 APOOLQ6UXV4 268 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 TFAP2EQ6VUC0 442 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 GTF2IRD2Q86UP8 949 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 LRRC8AQ8IWT6 810 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 ZNF525Q8N782 197 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 OR2V1Q8NHB1 315 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 OSTF1Q92882 214 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 MANSC1Q9H8J5 431 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 FAIMQ9NVQ4 179 aa14.37□□□□□ -0.11
USP48-210ENST00000489108 IGLV3-32A0A0A0MS00 114 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 DLX3O60479 287 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 ANGPTL1O95841 491 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 SLC25A16P16260 332 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 RFX3P48380 749 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 CDH11P55287 796 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 DECR1Q16698 335 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 HBMQ6B0K9 141 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 CCDC25Q86WR0 208 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 PTGR2Q8N8N7 351 aaPredicted RBP14.36□□□□□ -0.11
USP48-210ENST00000489108 OR4F6Q8NGB9 312 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 SELENOMQ8WWX9 145 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 KISS1RQ969F8 398 aaPredicted RBP14.36□□□□□ -0.11
USP48-210ENST00000489108 PHF21BQ96EK2 531 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 GPR78Q96P69 363 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 PLA2G12AQ9BZM1 189 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 TMEM185BQ9H7F4 350 aa14.36□□□□□ -0.11
USP48-210ENST00000489108 CCDC189A1A4V9 331 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 SLC35F4A4IF30 521 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 NDUFB5O43674 189 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 IL33O95760 270 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 IL3P08700 152 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 PYGBP11216 843 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 ZNF17P17021 662 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 RAC1P63000 192 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 CSTF3Q12996 717 aaKnown RBP14.35□□□□□ -0.11
USP48-210ENST00000489108 RAB35Q15286 201 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 TMEM201Q5SNT2 666 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 FAM120AOSQ5T036 256 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 LIPNQ5VXI9 398 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 ESPNLQ6ZVH7 1005 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 RPS27LQ71UM5 84 aaKnown RBP14.35□□□□□ -0.11
USP48-210ENST00000489108 TUSC5Q8IXB3 177 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 BANPQ8N9N5 519 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 ABHD3Q8WU67 409 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 FAM168AQ92567 244 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 SLC9A6Q92581 669 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 TBL1XR1Q9BZK7 514 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 CHODLQ9H9P2 273 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 SLC35C2Q9NQQ7 365 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 SENP1Q9P0U3 644 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 PCTPQ9UKL6 214 aa14.35□□□□□ -0.11
USP48-210ENST00000489108 PPP6CO00743 305 aa14.34□□□□□ -0.11
USP48-210ENST00000489108 KLHL2O95198 593 aa14.34□□□□□ -0.11
USP48-210ENST00000489108 UTS2O95399 124 aa14.34□□□□□ -0.11
USP48-210ENST00000489108 USF1P22415 310 aaPredicted RBP14.34□□□□□ -0.11
USP48-210ENST00000489108 PSMA4P25789 261 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms