RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 UQCRC1P31930 480 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 RAB38P57729 211 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 OLR1P78380 273 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 KLC1Q07866 573 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 STX3Q13277 289 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 SLAMF1Q13291 335 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 SYT16Q17RD7 645 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 DEFB109BQ30KR1 87 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 ARL13AQ5H913 290 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 C6orf89Q6UWU4 347 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 SHISA6Q6ZSJ9 500 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 ZCCHC23Q6ZST2 131 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 RP1L1Q8IWN7 2480 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 CLYBLQ8N0X4 340 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 CA13Q8N1Q1 262 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 RNF175Q8N4F7 328 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 ACOT4Q8N9L9 421 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 OR5T3Q8NGG3 340 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 APOBEC4Q8WW27 367 aaKnown RBP7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 R3HDM4Q96D70 268 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 ARPC5LQ9BPX5 153 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 SHCBP1LQ9BZQ2 653 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 PCDHAC1Q9H158 963 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 WDR41Q9HAD4 459 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 LYRM4Q9HD34 91 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 LYARQ9NX58 379 aaKnown RBP7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 MS4A12Q9NXJ0 267 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 VPS29Q9UBQ0 182 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 ZNF225Q9UK10 706 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 TP53TG5Q9Y2B4 290 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 RRP15Q9Y3B9 282 aaKnown RBP7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 FIS1Q9Y3D6 152 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 TIMM22Q9Y584 194 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 CSMD1Q96PZ7 3565 aa7.48□□□□□ -1.21
TRAPPC12-221ENST00000489032 SEC16AO15027 2179 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 PDZD2O15018 2839 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 UBFD1O14562 309 aaKnown RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 RGS14O43566 566 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 KLHL41O60662 606 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 B4GALT2O60909 372 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 CNOT3O75175 753 aaKnown RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 ALOX12BO75342 701 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 CDC123O75794 336 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 DCTN3O75935 186 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 SCELO95171 688 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 TGDSO95455 350 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 TBX6O95947 436 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 CHRNGP07510 517 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 UMODP07911 640 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 FGF4P08620 206 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 C8orf89P0DMQ9 161 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 NDUFB7P17568 137 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 BGNP21810 368 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 CPN2P22792 545 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 PPP2R1BP30154 601 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 SLC1A6P48664 564 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 CLCN2P51788 898 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 LIM2P55344 173 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 ABCE1P61221 599 aaKnown RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 AP2B1P63010 937 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 ACTN3Q08043 901 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 ACSM2AQ08AH3 577 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 ABRAXAS2Q15018 415 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 NSDHLQ15738 373 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 SPIN4Q56A73 249 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 TCHHL1Q5QJ38 904 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 SH2D4BQ5SQS7 431 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 CCNYL2Q5T2Q4 361 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 IRAK1BP1Q5VVH5 260 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 ACSM2BQ68CK6 577 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 FAM47EQ6ZV65 393 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 TRPM8Q7Z2W7 1104 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 GPR180Q86V85 440 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 DDIASQ8IXT1 998 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 ZNF595Q8IYB9 648 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 ZCCHC7Q8N3Z6 543 aaKnown RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 CLEC1AQ8NC01 280 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 PLPP5Q8NEB5 264 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 LINC00476Q8WZB0 136 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 KCNA7Q96RP8 456 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 HBEGFQ99075 208 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 CCT7Q99832 543 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 KRTAP9-9Q9BYP9 154 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 KRTAP9-4Q9BYQ2 154 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 AICDAQ9GZX7 198 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 ILKAPQ9H0C8 392 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 PRTFDC1Q9NRG1 225 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 FARSBQ9NSD9 589 aaKnown RBP7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 P4HTMQ9NXG6 502 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 FBXW2Q9UKT8 454 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 DAPP1Q9UN19 280 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 MMACHCQ9Y4U1 282 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 USH1CQ9Y6N9 552 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 FBN3Q75N90 2809 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 PCNX1Q96RV3 2341 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 SCN3AQ9NY46 2000 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 MED13LQ71F56 2210 aa7.47□□□□□ -1.21
TRAPPC12-221ENST00000489032 NSG1A0A0A6YYJ2 146 aa7.46□□□□□ -1.22
TRAPPC12-221ENST00000489032 ARGFXA6NJG6 315 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms